| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1115 |
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| Symbol | |
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| ID | 4309690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1223534 |
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| End bp | 1224430 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148923 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_773008 |
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| Protein GI | 115351169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.160058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCGC TTTCCGGTTC GTCCGCGTCG CCGCCGGCGC CCGCTCCGTC GCATGCGAAC
GGCGTCGCAC GACGCGCGCC GCGCGTCACG GGCGCGCGCG CGATCGCCGC GCTGCAATGG
AGCGTCACGC TGCTGCTGTG CGCGTTCCTG ATCGTGCCCG TCGTGATGTC GGTCCTCGCG
GGCCTCACCG TCAACTATTT CCGCGGGCTG TCGAGCGGCC TCACGCTGCG CTGGCTCGAA
CAGGTGTGGC AGCAATACCA GGGCTCGGTC GCGCTGTCGC TCGGCGTCGC GTTCGCGACG
CTCGCGATCG TGCTCGCCGT CGGCGTGCCG GCCGGCTATG CGCTCGCGCG CAGCAAGAGT
CGCGTCGCCC GCGCGATCGA GGAAGCGCTG GTGCTGCCGG TCGCGCTGCC GGGCCTCGCG
TCGGCGCTCG CGCTGCTGGT CGTGTACGGC GGCTTCACCG CGTTCCGGAT GAGCCTGTGG
TTCATCGTCG TCGGCCACGT CGTGTTCACG CTGCCGTTCA TGGTGCGCGC GGTCGCGGCC
GTCGCGGCGG GGGCCGACCT GCGCACGCTC GAGGAAAGCG CGGCGAGCCT CGGCGCGTCG
TTCGTCACGC GCTTCGTGAC GATCGTGCTG CCGAACCTGC GCCCCGGCAT CGTCGCGGGC
GCGCTCACGG TGCTCACGCT GTCGATCGGC GAATTCAACC TGACGTGGAT GCTGCACACG
CCCGACACGA AAACGCTGCC CGTCGGACTC GCCGATACCT ATGCATCGCT GCGCCTCGAA
GTCGGCAGCG CCTACACGAT CATGTTCCTG CTGATGACGC TGCCGCTCCT CGTCGCGATG
CAGTGGCTCG GCGTCGATCC GTCCGGCACG CGCGCGCTGA AGCGCCGCCC GCGCTGA
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| Protein sequence | MQSLSGSSAS PPAPAPSHAN GVARRAPRVT GARAIAALQW SVTLLLCAFL IVPVVMSVLA
GLTVNYFRGL SSGLTLRWLE QVWQQYQGSV ALSLGVAFAT LAIVLAVGVP AGYALARSKS
RVARAIEEAL VLPVALPGLA SALALLVVYG GFTAFRMSLW FIVVGHVVFT LPFMVRAVAA
VAAGADLRTL EESAASLGAS FVTRFVTIVL PNLRPGIVAG ALTVLTLSIG EFNLTWMLHT
PDTKTLPVGL ADTYASLRLE VGSAYTIMFL LMTLPLLVAM QWLGVDPSGT RALKRRPR
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