Gene Bamb_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1107 
Symbol 
ID4309682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp1216198 
End bp1216830 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID638148915 
Productcytochrome b561 
Protein accessionYP_773000 
Protein GI115351161 
COG category[C] Energy production and conversion 
COG ID[COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.342144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCG TTCCCGCCAC AGGTCGCGAC GCGGCGTCAC CGCCCGCGCG CCCGATCCAT 
CCGGTGTGGG TGCGCGTGAG CCACTGGCTC AACGCGCTCG CGGCGATCCT GATGGTGTTG 
TCCGGCTGGC GCATCTACGA CGCGTCGCCG ATCTATCCGC CGTTCACGTT TCCTCACGGC 
ATCACGCTCG GCGGCTGGCT GGGCGGCGCG CTGCAATGGC ATTTCGCGGC GATGTGGCTG 
CTCGTCGCCA ACGGATTGTT CTACCTCGCG ATGTCGATCA CGACCGGGCG CTTCGCGCGC 
ATGCTGCTGC CGGTCACGCC GGCGTCCGTT TGGCGCGACC TGCGTGCCGC ACTGCGCGGA 
CGGCTGGCGC ATGACGACCT CGGCGTCTAC AACGCGGTGC AGCGCACCGC GTACCTGACC 
GCGATCGTCG ACCTCGTCGT GCTGGTGCTG TCGGGGCTCA CCATCTGGAA GTCCGTGCAG 
TTTCCGCTGC TGCGCGAGCT GTTCGGCGGC TACGACATGG CGCGCGTCGT GCATTTCTGG 
GCGATGTCGC TGCTGGTCGC ATTCGTCGTC GTGCACGTCG CGATGGCGTT GCGCGTGCCG 
CGCTCGCTGC TCGCGATGCT GCGCGGACGT TGA
 
Protein sequence
MQTVPATGRD AASPPARPIH PVWVRVSHWL NALAAILMVL SGWRIYDASP IYPPFTFPHG 
ITLGGWLGGA LQWHFAAMWL LVANGLFYLA MSITTGRFAR MLLPVTPASV WRDLRAALRG 
RLAHDDLGVY NAVQRTAYLT AIVDLVVLVL SGLTIWKSVQ FPLLRELFGG YDMARVVHFW 
AMSLLVAFVV VHVAMALRVP RSLLAMLRGR