Gene Bamb_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1091 
Symbol 
ID4309666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1191449 
End bp1192222 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID638148899 
ProductABC transporter related 
Protein accessionYP_772984 
Protein GI115351145 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.287882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCTGC TCGAACTCGA CGACCTCTGC GTCGCCTACG ACACGCCGCA CGGCCGCCGC 
ACGGTGGTCG ACGGGCTGAG CCTCGCGCTG CCGCGCGGCG ACATCGGCTG CCTGCTCGGC
GCATCGGGCT GCGGCAAGAC CACCGTGCTG CGCGCGATCG CGGGCTTCGA GCCCGTGCGC
ATGGGGCGCA TCGTGCTGGA CGGCACGCCC GTCGCGGCGC CGTCGCTCGA CGTGCCGCCC
GAGCGGCGGC GCATCGGGAT GATGTTCCAG GACTATGCGC TGTTCCCGCA CCTGAGCGCG
GCCGACAACG TCGCGTTCGG CTTGCGGCGC ATGCCGAAGG CCGAGCGGCG CACCCGCGTC
GCGGACATGC TCGAACTCGT CGGTCTCGCC GATGCGGGCA GCGCGTATCC GCACGAACTG
TCGGGCGGCC AGCAGCAGCG CGTCGCGCTC GCCCGCGCGC TTGCGCCGTC GCCGGAGCTG
CTGCTGCTCG ACGAGCCGTT CTCGAATCTC GACGTCGATA CGCGCGAGCG GCTCGCGTTC
GAGCTGCGCG ACATCCTGAA ACGCACGGGT CATACCGCGG TTCTCGTCAC GCACAACCAG
GCGGAAGCGT TCGCGATCGC CGACCGGATC GGCGTGATGA AGGATGGCCG GCTCGCGCAA
TGGGACACGC CGTACGCGTT GCACCATCAT CCGGCCAGCG CGTTCGTCGC GGAGTTCGTG
CGCAGCGACG CGCTGGCGGA CGAACGCGCC CGGGCGCTGG CGCGCGGCCG CTGA
 
Protein sequence
MNLLELDDLC VAYDTPHGRR TVVDGLSLAL PRGDIGCLLG ASGCGKTTVL RAIAGFEPVR 
MGRIVLDGTP VAAPSLDVPP ERRRIGMMFQ DYALFPHLSA ADNVAFGLRR MPKAERRTRV
ADMLELVGLA DAGSAYPHEL SGGQQQRVAL ARALAPSPEL LLLDEPFSNL DVDTRERLAF
ELRDILKRTG HTAVLVTHNQ AEAFAIADRI GVMKDGRLAQ WDTPYALHHH PASAFVAEFV
RSDALADERA RALARGR