Gene Bamb_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1084 
Symbol 
ID4311143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1184733 
End bp1186691 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content67% 
IMG OID638148892 
Productphosphatase-like protein 
Protein accessionYP_772977 
Protein GI115351138 
COG category[R] General function prediction only 
COG ID[COG3211] Predicted phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCGT TGCCCAATGC TTCCCGTCGT CAGGCCCTGA AGATCCTCGC CGGCGCGCCC 
ATGCTGCCCC TCTCCGGCCT CGCGCTGCCG GCTCTCCTGA CCGGTTGCGG TGGCGACGAC
AATCCGACGG CGACGCCGGC CGCCGCCGCA TACACGTCGG CGGCGTTCTC GGCGATGGCC
GCGCCCTCGC TCGACAACGC GGCCGCGATG GCCACGACGA CGGTCGGCTC GACGCTGTCG
GTGTCGTTCT CGGACGGCTC GTCGCGCAAC TTCAAGCTGG CGTACCGGCC GTTCTTCGTG
ACGGGCGACA TGGTGCCGGA CGGCAAGGGC GGCACGACGC TCGCGGGCGG CTACTACGAC
ATCAACAACC AGCCGATCAT CGACCGCTCG GTGGCCGGCA AGGAGCGCCA GTTCTATTCG
GACTGCCCGG ACGGCAGCTC GCTGCTGACG CTGAAGAACG CGAACGTCGC CGGCGTGAAG
GGCAACACGG TGTTCGCGGT CGTGCAGTTC GAATACACGA CGCGCGACCA GGCGAGCGCA
TCGCAGTACG GCCAGCTGCC GTCGCCGATC GCGGTGATCA CGCTCGATCA GGATCCGTCC
AGCGGCGCGC TGAAGGTCGT CAAGTACCAC AACGTCGACA CGTCGAGCGC GCACGGCCTG
TGGATCACCT GCGGCGCGAG CCTGTCGCCG TGGGGCACGC ACCTGTCGAG CGAGGAATAC
GAGCCGGACG CGACGAAGGC CGCAACCGAT ACGCAGTTCA AGGCATTCAG CAAGAACACG
TTCGGCGACG AGACGAAGGC GAACCCCTAT CACTACGGCC ACCTGCCCGA GATCACGGTG
AACCCGGACG GCACCGGCAC GGTGAAGAAG CACTATTGCC TCGGCCGCAT CTCGCACGAG
CTGATCCAGG TGATGCCGGA CCAGCGCACC GTGATGATGG GTGACGACGC CACCAACGGC
GGCCTGTTCA TGTTCGTCGC CGACAAGGCG GCCGACCTGT CGGCCGGCAC GCTGTACGTC
GCGAAGTGGA CGCAGACGTC GTCCGCCGGC GCCGGCAGCG CGACGCTGAC GTGGATCAGG
ATCGGCCACG CGACGAGCAG CGAGATCGAG ACGCTCGCGA ACACGCTGAA GGCGTCGGAC
ATCATGGACC TGACGACGAC CGACCCGAGC GACGCGAGCT ACACGAAGAT CCACTTCGGC
GGCAAGTTCA ACTGGATGCG CGTGAAGCCG GGGATGGAAA AGGCGGCCGC GTTCCTCGAG
ACGCACCGCT ATGCGGCGCT GATCGGCGGC AGCATGGCGT TCACGAAGCT CGAAGGCACG
ACGGTGAACG CGAAGGACAA GATCGTCTAC ACGGCGATGT CGCGCATCGA GACGTCGATG
GTCAAGGGCA ACGCGGTGTC GCGCGACGTC GCGGTGGACA AGAAGATCGC CGCGGGCGCC
GTCTATGCGC TGAACCTGAA GGCCGGCCAG CGCGACACGT CGGGCGGCGC GATCGACAGC
GAATGGGTGC CGGTCGACAT GGGCGCGCCG GCGGCGCTCG TCGGCGAGGA CCTCGCCGCG
GCCGACGCGC TCGGCAACCT CGCGAATCCG GACAAGATCG CGAACCCCGA CAACCTGAAG
TTCTCGGAAA AGCTGCGCAC GCTCTTCATC GGCGAAGACT CGGGCATGCA CGTCAACAAC
TTCCTGTGGG CGTACAACGT CGACACGAAG TCGCTCGCGC GCGTGCTGTC GTGCCCGGCC
GGCGCCGAAT CGACGGGCCT GCACGCGGTC GACGAGATCA ACGGCTGGAC CTACGTCATG
AGCAACTTCC AGCACGTGGG CGACTGGGAG ACGCCGCTGC ACGACAAGGT CAAGTCGACG
CTCGACCCGC TCGTGCGCGC GAACTACAAG GACCGCTTCG GCGCCTGCGT CGGCTACCTG
ACGGCCGAGC CGACCAGCAT CAAGCTCGCG AAGGCCTGA
 
Protein sequence
MPALPNASRR QALKILAGAP MLPLSGLALP ALLTGCGGDD NPTATPAAAA YTSAAFSAMA 
APSLDNAAAM ATTTVGSTLS VSFSDGSSRN FKLAYRPFFV TGDMVPDGKG GTTLAGGYYD
INNQPIIDRS VAGKERQFYS DCPDGSSLLT LKNANVAGVK GNTVFAVVQF EYTTRDQASA
SQYGQLPSPI AVITLDQDPS SGALKVVKYH NVDTSSAHGL WITCGASLSP WGTHLSSEEY
EPDATKAATD TQFKAFSKNT FGDETKANPY HYGHLPEITV NPDGTGTVKK HYCLGRISHE
LIQVMPDQRT VMMGDDATNG GLFMFVADKA ADLSAGTLYV AKWTQTSSAG AGSATLTWIR
IGHATSSEIE TLANTLKASD IMDLTTTDPS DASYTKIHFG GKFNWMRVKP GMEKAAAFLE
THRYAALIGG SMAFTKLEGT TVNAKDKIVY TAMSRIETSM VKGNAVSRDV AVDKKIAAGA
VYALNLKAGQ RDTSGGAIDS EWVPVDMGAP AALVGEDLAA ADALGNLANP DKIANPDNLK
FSEKLRTLFI GEDSGMHVNN FLWAYNVDTK SLARVLSCPA GAESTGLHAV DEINGWTYVM
SNFQHVGDWE TPLHDKVKST LDPLVRANYK DRFGACVGYL TAEPTSIKLA KA