| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1079 |
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| Symbol | |
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| ID | 4311138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1176205 |
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| End bp | 1179324 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638148887 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_772972 |
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| Protein GI | 115351133 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAT CCCGCCTCTT CATTCTCCGG CCGGTCGGCA CCGCCCTCCT GATGGCGGCG
ATCATGCTGG CCGGCCTCGT CGCGCTGCGC TTCCTGCCGC TCGCCGCGCT GCCGGAAGTC
GACTACCCGA CGATCCAGGT CCAGACCTTC TATCCGGGCG CGAGCCCGGA GGTGATGACG
TCGTCGGTCA CCGCGCCGCT CGAGCGGCAA TTCGGGCAGA TGCCGTCGCT GAACCAGATG
TCGTCGCAAA GCTCGGCCGG CGCGTCGGTG ATCACGCTGC AGTTCTCGCT CGACCTGCCG
CTCGACATCG CCGAGCAGGA AGTCCAGGCC GCGATCAACG CGGCCGGCAA CCTGCTGCCG
TCCGACCTCC CGGCCCCGCC GATCTACGCG AAGGTCAACC CGGCCGACGC GCCGGTGCTG
ACGCTCGCCA TCACGTCGAA AACCTTGCCG CTCACGCAGG TGCAGGACCT GACCGATACG
CGCCTCGCGA TGAAGATCTC GCAGATCGCC GGCGTCGGCC TCGTCAGCCT GTCGGGCGGC
AACCGGCCGG CCGTGCGGAT CCAGGCGAAC CCGACCGCGC TCGCGCAGTA CGGGATGAAC
CTCGACGACC TGCGCACGAC GATCTCGAAC CTGAACGTGA ACACGCCGAA GGGCAACTTC
GACGGCCCGA CGCGCGCGTA CACGATCAAC GCCAACGACC AGCTCACCAG CGCCGACCAG
TACAACTCCG CGGTCGTCGC GTACAAGAGC GGCCGCCCGG TGATGCTGAC CGACGTCGCG
AAGGTGGTCG CCGGCTCGGA GAACACCAAG CTCGGCGCAT GGGTGAACGC GGAGCCGGCG
ATCATCCTGA ACGTGCAGCG CCAGCCGGGC GCGAACGTGA TCGCGACCGT CGACGCGATC
AAGGCGCAGC TGCCGAAGCT GCAGGAAACG CTGCCCGCGG CGCTCGACGT GCAGGTCGTC
ACCGACCGCA CGACGATGAT CCGCGCCGCC GTGCGCGACG TGCAGTTCGA GCTGCTGCTC
GCGGTCGTGC TGGTCGTGCT GGTGATGTAC CTGTTCCTCG CGAACGTCTA CGCGACGATC
ATCCCGAGCC TGTCGGTGCC GCTGTCGCTG ATCGGCACGC TCGCGGTGAT GTACATGGCC
GGCTTCTCGC TGAACAACCT GTCGCTGATG GCGCTCACCA TCGCGACCGG CTTCGTCGTC
GACGACGCGA TCGTGATGAT CGAGAACATC GCACGCTACG TCGAGGAAGG CCACACCGGC
CTCGAGGCCG CGCTGAAGGG GTCGAGGCAG ATCGGCTTCA CGATCATCTC GCTGACGGTG
TCGCTGATCG CGGTGCTGAT CCCGCTGCTG TTCATGGGCG ACGTGGTCGG CCGCCTGTTC
CACGAATTCG CGATCACGCT CGCGGTGACG ATCGTCATCT CGGCAATCGT GTCGCTCACG
CTCGTGCCGA TGATGTGCGC GAAGCTGCTG CGCCATTCGC CGCCGCCGGA AAGCCACCGC
TTCGAGGCGC GCGTGCACCG CGTGATCGAT GCGGTGATCG CGCGCTACGG GGTCGCGCTC
GAATGGGTGC TGAACCGCCA GGGCTCGACG CTCGTCGTCG CGCTGCTCAC GCTCGCGCTG
ACCGCCCTGC TCTACGTGTA CATACCGAAG GGCTTCTTCC CCGCGCAGGA TACCGGCGTG
ATCCAGGCGA TCACCCAGGC GCCGCAGTCG ATTTCCTACG GCGCGATGGC CGAACGTCAG
CAGGCGCTCG CGGCCGAGAT CCTGAAGGAT CCGAACGTCG AAAGCCTCAC GTCGTTCATC
GGCGTCGACG GCAGCAACAT CACGCTGAAC AGCGGCCGGA TGCTGATCAA CCTGAAGGCG
CGCGACCACC GCTCCGAGTC GTCCGCGCAG ATCATCCGCG ACCTGCAGCA GCGCGTCGCG
AACGTGACCG GCATCACGCT GTTCATGCAG TCGGTGCAGG ATCTGACGAT CGACTCGACC
GTGAGCCCGA CGCAGTACCA GTTCATGCTG ACGAGCCCGA ACCCCGACGA GTTCGCGACC
TGGGTGCCGA AGCTCGTCAC GCGGCTGCAG AAGGAGCCGT CGCTCGCCGA CGTCGCGACC
GACCTGCAGA GCAACGGCCA GTCGGTGTAC ATCGAGATCG ACCGCGCCAG CGCCGCGCGC
TTCGGCATCA CGCCGGCGAC CGTCGACAAC GCGCTGTACG ACGCGTTCGG CCAGCGCATC
GTGTCGACGA TCTTCACGCA GTCGAACCAG TACCGCGTGA TTCTCGAGTC GGAGCCGAAG
GAGCAGCATT ACGCCGAATC GCTGAACGAC ATCTACCTGC CGTCCGCCGG CGGCGGCCAG
GTGCCGCTGT CGTCGATCGC GTCGTTCCAT GAACGGCCGT CGCCGCTGCT GATCGCGCAC
CTGTCGCAGT TCCCGTCGAC GACGATCTCG TTCAACCTCG CCCCGGGCGC GTCGCTCGGC
GAGGCCGTGA AGGCGATCGG CGCGGCCGAG AAGGACATCG GCCTGCCCGG CTCGTTCCAG
ACGCGCTTCC AGGGCGCGGC GCTCGCGTTC CAGGCGTCGC TGTCGAACCA GCTGTTCCTG
ATCCTCGCGG CGGTCATCAC GATGTACATC GTGCTCGGCG TGCTGTACGA GAGCTACATC
CACCCGATCA CGATTCTGTC GACGCTGCCG TCGGCCGGCG TCGGCGCGCT GCTCGCGCTG
ATGATCACCG GGCACGACCT CGACATCATC GGGATCATCG GGATCGTGCT GCTGATCGGC
ATCGTGAAGA AGAACGCGAT CATGATGATC GACTTCGCGC TCGAGGCCGA ACGGGTCGAG
GGCAAGCCGC CGCGCGAGGC GATCTACCAG GCGTGCCTGC TGCGCTTCCG GCCGATCCTG
ATGACGACGC TCGCCGCGCT GCTCGGCGCG GTGCCACTGA TCGTCGGCGC GGGCGCCGGC
TCCGAGCTGC GCCAGCCGCT CGGGATCGCG ATCGCCGGCG GCCTGATCGT GTCGCAGGTG
CTGACGCTGT TCACGACGCC GGTGATCTAT CTCGGCTTCG ACAGCCTCGC GCGCCGCGCG
CGCGGCTGGT TCGAGCGGTA CGGCCCCGGC GCCGACGCCG GCAAGCGCAC GGATGTGTAA
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| Protein sequence | MNPSRLFILR PVGTALLMAA IMLAGLVALR FLPLAALPEV DYPTIQVQTF YPGASPEVMT
SSVTAPLERQ FGQMPSLNQM SSQSSAGASV ITLQFSLDLP LDIAEQEVQA AINAAGNLLP
SDLPAPPIYA KVNPADAPVL TLAITSKTLP LTQVQDLTDT RLAMKISQIA GVGLVSLSGG
NRPAVRIQAN PTALAQYGMN LDDLRTTISN LNVNTPKGNF DGPTRAYTIN ANDQLTSADQ
YNSAVVAYKS GRPVMLTDVA KVVAGSENTK LGAWVNAEPA IILNVQRQPG ANVIATVDAI
KAQLPKLQET LPAALDVQVV TDRTTMIRAA VRDVQFELLL AVVLVVLVMY LFLANVYATI
IPSLSVPLSL IGTLAVMYMA GFSLNNLSLM ALTIATGFVV DDAIVMIENI ARYVEEGHTG
LEAALKGSRQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF HEFAITLAVT IVISAIVSLT
LVPMMCAKLL RHSPPPESHR FEARVHRVID AVIARYGVAL EWVLNRQGST LVVALLTLAL
TALLYVYIPK GFFPAQDTGV IQAITQAPQS ISYGAMAERQ QALAAEILKD PNVESLTSFI
GVDGSNITLN SGRMLINLKA RDHRSESSAQ IIRDLQQRVA NVTGITLFMQ SVQDLTIDST
VSPTQYQFML TSPNPDEFAT WVPKLVTRLQ KEPSLADVAT DLQSNGQSVY IEIDRASAAR
FGITPATVDN ALYDAFGQRI VSTIFTQSNQ YRVILESEPK EQHYAESLND IYLPSAGGGQ
VPLSSIASFH ERPSPLLIAH LSQFPSTTIS FNLAPGASLG EAVKAIGAAE KDIGLPGSFQ
TRFQGAALAF QASLSNQLFL ILAAVITMYI VLGVLYESYI HPITILSTLP SAGVGALLAL
MITGHDLDII GIIGIVLLIG IVKKNAIMMI DFALEAERVE GKPPREAIYQ ACLLRFRPIL
MTTLAALLGA VPLIVGAGAG SELRQPLGIA IAGGLIVSQV LTLFTTPVIY LGFDSLARRA
RGWFERYGPG ADAGKRTDV
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