| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1061 |
|---|
| Symbol | argD |
|---|
| ID | 4311242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1151938 |
|---|
| End bp | 1153170 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638148869 |
|---|
| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
|---|
| Protein accession | YP_772954 |
|---|
| Protein GI | 115351115 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.637479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCT CGACCGTGAC CCGCCAGACA TTCGACGAAG TGATGGTGCC GGTATTCTCC
CCCGCGCCGT TCGTGCCGGA CCGTGCAGAG GGCTCCCGCG TGTGGGACAC GGCCGGCCGC
GAATACGTGG ATTTCGCGTG CGGCATCGCG GTGACGTCGC TGGGTCACGG CCACCCGGAA
CTGCTGAAAG TCCTGGACGA ACAAGGCCGC AAGCTCTGGC ACATCGGCAA CGGCTACACG
AACGAACCGG TGCTGCGCCT CGCGAAGCGC CTCGAATCGC TGACCTTCGC CGACCGCGCA
TTCTTCGCGA ACTCGGGCGC GGAAGCGAAC GAAGCCGCGC TGAAGCTCGC GCGCCGCGTC
GCATTCGACC GCCACGGCGC CGACAAATAC GAAATCGTAT CGTTCGTCCA GTCGTTCCAC
GGCCGCACGT TCTTCACGGT CAGCGTCGGC GGCCAGCCGA AATACTCGGA AGGCTTCGGC
CCGGTGCCGG CCGGCATCAA GCACCTGCCG TTCAACGACA TCGGAGCCGC CAAGGCCGCG
ATCGGCCCGC AAACCTGCGC GGTGATCGTC GAGCCGGTGC AGGGCGAAGG CGGCGTGATC
CCGGCCGATC CGGCCTTCCT GAAAGCACTG CGCGAAGCCT GCGACGCGCA CGACGCAGTG
CTGATCTTCG ACGAAGTGCA AACGGGCGTC GGCCGCACGG GCCAGTTCTA CGCCTACATG
GACACGGGCG TCACGCCGGA CATCCTCACG ACCGCGAAGG CGCTCGGCAA CGGCTTCCCG
ATCGGCGCGA TGCTGACGAC GAACGAGCTG GCCGCGCACT TCAAGGTCGG CGTGCACGGC
ACGACGTACG GCGGCAACCC GCTCGCGTCG GCAATCGCGG ACAAGGTCGT CGAACTGGTC
GGCGACCCGG CACTGCTCGA AGGCGTGCGC GAACGCAGCG TGCGACTGAA GGGCGCGCTC
GAACGCATCA ACGCACGCTT CGGCATCTTC AAGGACATCC GCGGCAAGGG CCTGCTGGTC
GGCGCGGAAC TGACCGCCGC CTTCGACGGC CGCGCGAAGG ACTTCGTCAC GGCCGCCGCC
GAGAACGGCC TGATCATGCT GATCGCAGGC CCGAACGTGC TGCGTTTCGT GCCGTCGCTC
GTGATTCCGT TCGACCTGCT CGACGAAGGC ATGAAGCGCT TCGAGAAGGC AGTCGAACAG
GTGCTCGCGC CCCAGGAAGC CACCGCGCGC TGA
|
|---|
| Protein sequence | MTTSTVTRQT FDEVMVPVFS PAPFVPDRAE GSRVWDTAGR EYVDFACGIA VTSLGHGHPE
LLKVLDEQGR KLWHIGNGYT NEPVLRLAKR LESLTFADRA FFANSGAEAN EAALKLARRV
AFDRHGADKY EIVSFVQSFH GRTFFTVSVG GQPKYSEGFG PVPAGIKHLP FNDIGAAKAA
IGPQTCAVIV EPVQGEGGVI PADPAFLKAL REACDAHDAV LIFDEVQTGV GRTGQFYAYM
DTGVTPDILT TAKALGNGFP IGAMLTTNEL AAHFKVGVHG TTYGGNPLAS AIADKVVELV
GDPALLEGVR ERSVRLKGAL ERINARFGIF KDIRGKGLLV GAELTAAFDG RAKDFVTAAA
ENGLIMLIAG PNVLRFVPSL VIPFDLLDEG MKRFEKAVEQ VLAPQEATAR
|
|---|
| |