Gene Bamb_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0936 
Symbol 
ID4308674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1028928 
End bp1029581 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID638148738 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_772829 
Protein GI115350990 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGTG AGATGTTCGA TATGTTCGTG CAGTCGTTCT GGGAGACGCT GATCATGGTC 
GGCATCTCGG GAGCGGTCGG CGCGCTCGTC GGGCTGCCGC TCGGCGTGCT GCTGTACCTG
ACCGACCGTC AGGGCGTGCT GCAGAACCTC GGCTTGAATC GCGTGCTCGG CGGCATCGTC
AACGCAGTGC GCTCGACGCC GTTCATCATC CTGCTGGTCG CGGTCATTCC GCTCACGCGG
CTCGTCACGG GGTCGTCGAT CGGCACGGCC GCGGCGGTCG TACCGCTGAC GCTCGCGGCC
GCGCCGTTCG TCGCGCGGCT GGTCGAGACC GCGCTGCGCG AGGTCGACCG CGGGCTGATC
GAGGCCGCGC AATCGATGGG CGCGACGACG TCGCAGATCG TGTTCAAGGT GCTGCTGCCC
GAATCGCTGC CGGGCATCGT CGCGGGCCTG ACGATCACGT TCGTGTCGCT CGTCGGCTAT
TCGGCGATGG CCGGTGCGAT CGGCGGCGGC GGGCTCGGCG ATCTGGGGAT CCGCTACGGC
TACCAGCGCT ATCTGCCGGA AGTGATGTGG ACGGTCGTCG CGATCCTGAT CGTGTTCGTG
CAGATCGTGC AATCGTTCGG CGACTGGCTC GTGCGCCGGC TGAGCCACAA GTAA
 
Protein sequence
MLSEMFDMFV QSFWETLIMV GISGAVGALV GLPLGVLLYL TDRQGVLQNL GLNRVLGGIV 
NAVRSTPFII LLVAVIPLTR LVTGSSIGTA AAVVPLTLAA APFVARLVET ALREVDRGLI
EAAQSMGATT SQIVFKVLLP ESLPGIVAGL TITFVSLVGY SAMAGAIGGG GLGDLGIRYG
YQRYLPEVMW TVVAILIVFV QIVQSFGDWL VRRLSHK