| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0709 |
|---|
| Symbol | |
|---|
| ID | 4308997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 787696 |
|---|
| End bp | 788592 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638148504 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_772602 |
|---|
| Protein GI | 115350763 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGT CGCTTTATTT CGTCACCGTG CTGATTTGGG GCACCACCTG GATCGCGATC
AAGTGGCAGC TCGGCGCCGT GCCGCCGCCC GTGTCGATCG CGTGGCGCTT CTGGCTTGCC
GCCGCCGTGC TGTTCGCGCT GCTGCGCGTG ATGCGCCGGC CGGTGCGTCC GCCCCGAGAA
GCGTGGCGCT ACCTCGTCGC CCAGGGCGTC GCGCTGTTCT GCGTCAATTT CCTGTGCTTC
TACTATTCGG AGCAGGTCGT GCCGAGCGGC CTCGTCGCCG TGATCTTCTC GACCGCGCCG
CTGCTGAATT CGATCAACGG CCGGCTTTTC ATGGGCCGGC CGCTGCGGCC GTCGGCGATC
GCCGGCGCGC TGCTCGGGCT GACAGGCATC GCGTGCCTGT TCTGGCAGCA GATGGCCGGC
CACCTGGACG ATCACGCGAC CTGGACGGGC CTCGCGATCG CATTCGCCGG CACGATGTGC
TTCTCGGCCG GCAACCTGCT GTCGAGCCGG ATGCAATCGA TGGGCCTGCA TCCGCTCGCG
ACCAACGGCT GGGCGATGCT GATCGGCGCG GCGATCCTCA CGGTCGGCAG CGCGGCGGCC
GGGTTGCCGT TCACGATCGA CCCGAGCCCG CGCTATCTCG GCGCGCTCGT CTACCTGGCC
GTGCCGGGCT CGGTGATCGG GTTCACTGCC TACCTGACGC TGGTCGGGCG GATCGGGCCG
GAGCGCGCCG CGTACTGCAC GGTGCTGTTC CCGATCGTCG CGCTGGCCGT GTCGACGGTC
TTCGAGGGCT ATCAATGGTC GCCGCTCGCG GTGATCGGGC TGCTGCTCGT GCTGGCCGGC
AATCTGGTCG CGTTCGATTT GACGCGGCGG TTGTTTCCGA GGACGGCGCG AGCCTGA
|
|---|
| Protein sequence | MNLSLYFVTV LIWGTTWIAI KWQLGAVPPP VSIAWRFWLA AAVLFALLRV MRRPVRPPRE
AWRYLVAQGV ALFCVNFLCF YYSEQVVPSG LVAVIFSTAP LLNSINGRLF MGRPLRPSAI
AGALLGLTGI ACLFWQQMAG HLDDHATWTG LAIAFAGTMC FSAGNLLSSR MQSMGLHPLA
TNGWAMLIGA AILTVGSAAA GLPFTIDPSP RYLGALVYLA VPGSVIGFTA YLTLVGRIGP
ERAAYCTVLF PIVALAVSTV FEGYQWSPLA VIGLLLVLAG NLVAFDLTRR LFPRTARA
|
|---|
| |