Gene Bamb_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0707 
Symbol 
ID4308995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp785357 
End bp786568 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID638148502 
Productaminotransferase, class V 
Protein accessionYP_772600 
Protein GI115350761 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG ATTACTCGCC GATTCCCTGT CCCGTCGTCG TGCCGCTCGA CGCGATCCTG 
CCCGAAGAAC CGCTGCTGAT GATGGGGGCC GGCCCGGTCC CGATCCCGGC CGCCGTCGCG
AAGGCGAACA CGATCGTGAT CAACCACCTC GGCGCGACGA TGGCGAAGAT CATCGAGCAG
GTGAAGGAGA TGGCGCGCTA CGTGTTCCAG ACCCGCACGA AATGGGTGCT CGGCGTGGCC
GGCCCCGGCT CGGCCGCGAT GGAAATGGCG ATCTCGAACC TCGCGTGGCG CGGCACGCGC
GTGCTGTCGA TCCGCAACGG CTTCTTCAGC GCGCGGATGG CCGAGATGGC GACGCGCGTC
GGCGCCGACG TCGCGACGCT CGAAGTGGCC GACCGCGCGG TCGCGAGCCT CGACGAGATC
GCGGACGCCA TCGCGCGCGA GCGGCCCGAG ATCGTCACGA TCGTGCAGGG CGAAACGTCG
AACACTGTAT GGAACCGCGA ACTGCGCGAG ATCGCGGCAC TCGCGAAGGC GGCCGGCGCG
CTGGTCGTCG TCGATGCGGT GTGCACGCTG TCGACGATGC CGCTCGAAAT GGACGCGTGG
GGCATCGACG CGGTGATCAC CGGCGGCCAG AAGGGGTTGT CGTCGATCCC CGGCGTGTCG
CTGATCGCAT TCTCCGACGC CGCGTGGAAC CGGATGAAGC AGCGTCCGGA ACCGAACGCG
CACTGGTGCC TCGACATGGC GCTCGCGGAG AACTTCTGGC ACAACGCGGG CTATCACTAC
ACGGCGCCGG TGTCGGGCGT GCTCGCGCTG CACGAGGCGC TGCGCCTCGT CTGCGCGGAG
ACGCTCGAAA GCCGCTTCGC GCGCCACCTG CGCTGCTCGC TCGCGCTGCA GGCGGGCGTC
GAGGCGATGG GGCTCACGCT CTACGCGCCG AAAGAGTGCC GGCTCAATTC GGTGGTCGGG
ATCGAGACGC CCGAGGGGCT CACGCCCGGG ATGGTGTGCG GCCATATCTC GAAGCAGTAC
CAGGTCGAGA TCTCGGGCTC GTTCGGGCTG CCGATCGTGC GGATCGGGCA GATGGGCGAA
CAGTGCCGCG AACACAACCT GTTCCGCACG CTGCATGCGT TCGGCCGCAC GATGGACGAT
CTGAAGGTGC CGGTCGACCT GCCGGCCGGC GTGGCCGCGC TCGAGCAGGA GCTGTCGCGG
CGGGGCGCGT AA
 
Protein sequence
MSIDYSPIPC PVVVPLDAIL PEEPLLMMGA GPVPIPAAVA KANTIVINHL GATMAKIIEQ 
VKEMARYVFQ TRTKWVLGVA GPGSAAMEMA ISNLAWRGTR VLSIRNGFFS ARMAEMATRV
GADVATLEVA DRAVASLDEI ADAIARERPE IVTIVQGETS NTVWNRELRE IAALAKAAGA
LVVVDAVCTL STMPLEMDAW GIDAVITGGQ KGLSSIPGVS LIAFSDAAWN RMKQRPEPNA
HWCLDMALAE NFWHNAGYHY TAPVSGVLAL HEALRLVCAE TLESRFARHL RCSLALQAGV
EAMGLTLYAP KECRLNSVVG IETPEGLTPG MVCGHISKQY QVEISGSFGL PIVRIGQMGE
QCREHNLFRT LHAFGRTMDD LKVPVDLPAG VAALEQELSR RGA