Gene Bamb_0684 details

Gene Information

• Locus tag: Bamb_0684
• Symbol: nrdR
• ID: 4308561
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 764119
• End bp: 764598
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 638148479
• Product: transcriptional regulator NrdR
• Protein accession: YP_772577
• Protein GI: 115350738
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.701389
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTGCC CGTTCTGCCG GCATGAAGAC ACGCAGGTCG TCGACTCGCG CGTGTCCGAA 
GATGGCGCCG CCATTCGCCG GCGCCGTCGC TGCTCGGCTT GCGACAAGCG CTTCACGACG 
TACGAGCGGG TCGAGCTGAA CCTGCCGGCC GTCGTGAAGA AGGACGGCAG CCGCACGGAA 
TTCGACCGTC GCAAGATCGT CGCAAGCATG CAACTCGCGC TGCGCAAGCG GCCGGTTGCG 
GCTGACGCGA TCGACGCGGC GGTCGCCCGC ATCGAATATC AACTGCTCGC TACCGGCGAG 
CGGGAAGTGC GTAGCGAGAA GCTCGGCGAA CTCGTGATGA ACGAGTTGCG TGGCCTCGAT 
ACGATCGCCT ATGTCCGTTT CGCATCGGTT TACCGCCGGT TCGAGGACGT TTCCGAATTT 
GCCGACGTGA TCGAAGAGTT CCGTCGCGCG TCCCCCTCCA AGCCTTCGCG TAAGCGCTGA 

 

Protein sequence

MRCPFCRHED TQVVDSRVSE DGAAIRRRRR CSACDKRFTT YERVELNLPA VVKKDGSRTE 
FDRRKIVASM QLALRKRPVA ADAIDAAVAR IEYQLLATGE REVRSEKLGE LVMNELRGLD 
TIAYVRFASV YRRFEDVSEF ADVIEEFRRA SPSKPSRKR