| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0594 |
|---|
| Symbol | |
|---|
| ID | 4308541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 665981 |
|---|
| End bp | 666901 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638148388 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_772487 |
|---|
| Protein GI | 115350648 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0354843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGG ATGATATCGC CGGGCTCGAC CTGAACCTGC TGAAGGTGTT CGAGGCGCTG
TACGAGGAAG GCGGCGCGAG CCGCGCGGCG CTGCGGCTCG GCCTCACGCA GTCGGCGGTC
AGCGCGGCGC TCGCGCGGCT GCGCGTGATC TACGCCGATC CGCTGTTCGT GCGCACCGGC
CGCGGGCTCG CGCCGACGCC GCGCGCGGAC GAACTGAAGC CGATCCTGTC CGATGCGCTC
GACCGCTGCC GCGAAAGCCT CGCGATCGCG GCCGACGGCG GCGAGCGGGT CGGCCGCACG
ATCTCGATCG GCTTGTCGGA CGACTTCGAG ATCGCGCTCG GCCGCGCGCT GATCGACGCG
GTCGTGCGGG AAGCCGCAGG CATCCGGCTG ATCTTCCGGC AGACGCACAG CGGCATCGCG
GGCGACGCGC TGCTGCGGCA CGGCGTCGAT CTCGCGATCG CGTCGGGCGG GTTCTCGGCC
AACGGCCTGA GCCGGCGCGC GGTCGCGACG GGCGGCTACG CGTGCCTGAT CGATCCGTCC
GGCCGCGCGC GAGCGCCGCG CACGCTCGCG CTCGCCGAGT TCCTGCAGCG CGATCACGGG
CTCGTGTCGT CGGGCGGCGT GATCGGGATC GTCGACGAGG CGCTGGCCGC GCTCGGCCAC
AAGCGGCGCG TCGTGGCCTC GACCACGCAC TTCGCGGCGC TGCCGTACCT GCTCGCCGGT
TCCGCCGCGG TGGCGACGAT TCCGGCGCAC GCGGCACGCG CGATCGCGCA GTCGACGTCG
CTGCGCGCCC TCGCGTGCCC GGTCGAGCTG CCGCGCTACC CGGTGGAGAT CGGCTGGCGC
ACGAGCACGC AGCGCGACCC GGCGATCGTG CGCGTGCGGG ATACGATCGC CGGCTGTGTC
GCGGCGATCG TCGCGCCGTG A
|
|---|
| Protein sequence | MNADDIAGLD LNLLKVFEAL YEEGGASRAA LRLGLTQSAV SAALARLRVI YADPLFVRTG
RGLAPTPRAD ELKPILSDAL DRCRESLAIA ADGGERVGRT ISIGLSDDFE IALGRALIDA
VVREAAGIRL IFRQTHSGIA GDALLRHGVD LAIASGGFSA NGLSRRAVAT GGYACLIDPS
GRARAPRTLA LAEFLQRDHG LVSSGGVIGI VDEALAALGH KRRVVASTTH FAALPYLLAG
SAAVATIPAH AARAIAQSTS LRALACPVEL PRYPVEIGWR TSTQRDPAIV RVRDTIAGCV
AAIVAP
|
|---|
| |