| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0426 |
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| Symbol | |
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| ID | 4309789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 476147 |
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| End bp | 477538 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638148214 |
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| Product | GABA permease |
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| Protein accession | YP_772319 |
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| Protein GI | 115350480 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGAA GCAACACAGG CCTCGGCACG GGCCTGAAGC AGCGTCACGT GACGATGATG
TCGATTGCCG GCGTCATCGG CGCGGGCTTG TTCGTCGGCT CCGGCCACGC GATCGCCGAG
GCCGGCCCGG CTTCGATCCT CGCGTATGCG ATCGCGGGCA TGCTGGTCGT GCTGGTGATG
CGCATGCTCG GCGAGATGGC CGTCGCGCAT CCGGACAGCG GTTCGTTCTC GACCTATGCC
GATCGCGCGA TCGGCCACTG GGCAGGCTTC ACCATCGGCT GGCTGTACTG GTGGTTCTGG
GTGCTCGTGA TCCCGATCGA GGCGACGGCC GCCGCGACCA TTCTCAATGC GTGGTTCCCC
GGCGTCGCGA CCTGGATCTT CGCGCTCGGC ATCACGCTGC TGCTGACGAT CACCAATCTC
TTCTCGGTCA AGAACTACGG CGAATTCGAA TTCTGGTTCG CGCTGATCAA GGTCGTCGCG
ATCGTCGTGT TCCTGTGCAT CGGCGGTGCG GCGATCGTCG GCATCGTGCC TGCGCCGGCC
GTGTCGGGCG TGTCGAACCT GTTTGCGCAT GACGGCTTCA TGCCGCATGG CGCCGGCGCG
GTGCTCGCGG CGATGCTGAC GACGATGTTC TCGTTCCTCG GCACCGAGAT CGTGACGATC
GCGGCCGCCG AATCGGATAA CCCGCAACGC CAGATCGTGC GTGCGACGAA TTCGGTGATC
TGGCGGATCA CGCTGTTCTA TCTCGGCTCG ATCCTCGTCG TCGCGGCGAT CGTGCCGTGG
AACGATCCGC TGCTGCCGAA GCACGGCTCG TATCAGCGTG CGATGGAGCT GATCGGCGTG
CCGAACGCAA AGGCGATCAT CGACGTGATC GTGCTCGTGT CGGTCGCGAG TTGCCTGAAT
TCCGCGCTGT ACACCGCGTC GCGGATGCTG TTCTCGCTGT CCCGGCGCAA GGACGCGCCC
GCGTTCCTGC ACCGCACCGA TTCGACCGGC ACGCCGCGTG CGGCCGTGCT CGCATCGACG
GCGTTCGGTT TCCTGACCGT GATCGCCAAC TACCTGATGC CGGAACAGGT GTTCGGCTTC
CTGCTGGCGA CGTCGGGCGC GATCGCGCTG CTCGTGTATC TCGTGATCGC GATCTCGCAG
CTGCGGATGC GCAAGACGCT CGAATCGGGC GGCGCCGACC TGCCGCTGCG GATGTGGCTG
TTCCCGTGGC TCACGTGGGC GGTGATCCTG TTCATTTGCG GTACGCTGAC CGTGATGTTC
GTCAGCGAGG AACACCGGAT GGAAGTGGGG GCGACGGCCG TGCTGGCGTT GATCGTGCTG
TTTGCCGCGT GGCTGAACAA GCGGGGGCGT GATGCGCGGG TCAGTGAAGG GCGGCGCGTG
TCGGCGATGT GA
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| Protein sequence | MSGSNTGLGT GLKQRHVTMM SIAGVIGAGL FVGSGHAIAE AGPASILAYA IAGMLVVLVM
RMLGEMAVAH PDSGSFSTYA DRAIGHWAGF TIGWLYWWFW VLVIPIEATA AATILNAWFP
GVATWIFALG ITLLLTITNL FSVKNYGEFE FWFALIKVVA IVVFLCIGGA AIVGIVPAPA
VSGVSNLFAH DGFMPHGAGA VLAAMLTTMF SFLGTEIVTI AAAESDNPQR QIVRATNSVI
WRITLFYLGS ILVVAAIVPW NDPLLPKHGS YQRAMELIGV PNAKAIIDVI VLVSVASCLN
SALYTASRML FSLSRRKDAP AFLHRTDSTG TPRAAVLAST AFGFLTVIAN YLMPEQVFGF
LLATSGAIAL LVYLVIAISQ LRMRKTLESG GADLPLRMWL FPWLTWAVIL FICGTLTVMF
VSEEHRMEVG ATAVLALIVL FAAWLNKRGR DARVSEGRRV SAM
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