Gene Bamb_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0179 
Symbol 
ID4308600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp211406 
End bp211903 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content68% 
IMG OID638147958 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_772074 
Protein GI115350235 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.637096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGC GCATTCAACG CATCACGCCG TTTCTGTGGT TCGACCAGGA CGCGGAGGCG 
GCCGCCCGCT TCTACGTGTC GGTGTTCGAC GACGCGCGCA TCCTGCACGT CGCCCGCTAC 
GGCAAATCCG GCGCGCAGGC GTCGGGCCAG GCCGAGGGCA CGGTAATGAC GGTGTCGTTC 
GAACTCGACG GGCAGGCGTT TCTCGCGCTC AACGGCGGCC CGGTGTTTCC GCTCACGCCG 
GCCGTGTCGT TCGTCGTCAA TTGCCGCGAC CAGCAGGAGA TCGACCGCTA CTGGGCGGCG 
CTGGCCGAAG GCGGCGACGA GCGCGCGCAG CAGTGCGGGT GGCTACGCGA CCGCTTCGGC 
GTGTCGTGGC AGGTGGTGCC CGTGCAGATG GCCGAGCTGA TGACGGGCGA CCCGGCACGC 
GCCGAACGCG TGATGGCGCA GGTAATGAAG ATGAAGAAGC TCGATCTCGA TGCGTTGCAG 
CAGGCGGCGG CCGGCTAG
 
Protein sequence
MSQRIQRITP FLWFDQDAEA AARFYVSVFD DARILHVARY GKSGAQASGQ AEGTVMTVSF 
ELDGQAFLAL NGGPVFPLTP AVSFVVNCRD QQEIDRYWAA LAEGGDERAQ QCGWLRDRFG 
VSWQVVPVQM AELMTGDPAR AERVMAQVMK MKKLDLDALQ QAAAG