Gene Bamb_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0016 
Symbol 
ID4309452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp25464 
End bp26477 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID638147794 
Producthypothetical protein 
Protein accessionYP_771911 
Protein GI115350072 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCGAGA CGTCTGACCT GACGGCCACG AGCGGTGGCC TGCAACCCGC CCGCGATTCG 
CGGCCGAGCG CGTTCGAGCG CGACCTGATC GACGGACTGT CGCGCACGCC GCGCAGCATT
TCGCCGAAAT ACTTCTACGA TGCGGCCGGC TCCGCGCTGT TCGATCGCAT CTGCGAACTG
CCCGAGTATT ACCCGACGCG CACAGAGCTC GGCATCCTGC GCGACCGCGC GGCGGAGATC
GTGCGGCGCG TCGGCCCGCA TGCGGACATC GTCGAATTCG GCGCGGGCTC GCTCGAGAAG
ATCCGCGTGC TGCTCGACGC ATGCGCGGAC AACTACGCGA ACGCGCCTGC GCGCTACGTG
CCGATCGACA TCTCGGCCGA CTACCTGCAC GGCGCCGCGG CGCGGCTGCG TGCCGCGTAT
CCGTGGCTCG ACGTCGCGCC GATCGCGGCC GACTACACGA AGGCCGAACA ACTCGCGGAG
CTGACCGAAA CGCCGCGCCG GCGCATCGGC TTCTTCCCCG GCTCGACGAT CGGCAACTTC
TCGCCGGAGG AAGCCGACGC GTTCCTGCGC GACGCCGCGC GGCTGTTGCG CGGCGGCGGC
TTGCTGGTCG GCGCGGATCT CGTGAAGGAC GAGCGCACGC TCCACGACGC GTACAACGAC
GCGCAGGGCG TGACCGCGCA GTTCAACCTG AACCTGCTCG CCCGCGCGAA TGCGGAACTT
GGCGCGGACT TCGATCTCGA CGCGTTCTCG CACTGCGCGT TCTACGATCG CGAGCGGCAG
CGCATCGAGA TGCATCTCGT CAGCGATATC GCGCAGACGG TGCATGTGCG CGGCCATGTG
TTCCGCTTCG ACGCCGGCGA GCGCATCCAC ACGGAGAACT CGCACAAGTT CACGATCGAC
GGCTTCCATG CGATCGCACG GCGTGCGGGC TTCGAGCCCG ACACCGTGTG GACCGATGCG
GACAACCTGT TCAGCGTGCA CTGGCTGCGC AGCGTCGACG ATATCCGCGC TTGA
 
Protein sequence
MRETSDLTAT SGGLQPARDS RPSAFERDLI DGLSRTPRSI SPKYFYDAAG SALFDRICEL 
PEYYPTRTEL GILRDRAAEI VRRVGPHADI VEFGAGSLEK IRVLLDACAD NYANAPARYV
PIDISADYLH GAAARLRAAY PWLDVAPIAA DYTKAEQLAE LTETPRRRIG FFPGSTIGNF
SPEEADAFLR DAARLLRGGG LLVGADLVKD ERTLHDAYND AQGVTAQFNL NLLARANAEL
GADFDLDAFS HCAFYDRERQ RIEMHLVSDI AQTVHVRGHV FRFDAGERIH TENSHKFTID
GFHAIARRAG FEPDTVWTDA DNLFSVHWLR SVDDIRA