| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6650 |
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| Symbol | |
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| ID | 6181700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | + |
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| Start bp | 145788 |
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| End bp | 146729 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641685406 |
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| Product | fimbrial protein |
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| Protein accession | YP_001812311 |
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| Protein GI | 172064661 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000136296 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACCA ACTGCCAATC GGCTACACTA AGCCCCACCC GCTGGGGCGT CGCCATCCTC
CTCCTTCTGC CAGTCACCGG GGAAACCCAA GCCGCCACGA TTAACGCGTT CGGCCAAGCG
ATTTCCGTAC CCTCAACCGC CCCTGCCGGG ACTGTCATCG CGCGACAAGC CATCAGCCCC
AACGAAGCCT GCGCAAGCGA CCGCTGCGAA ATTACTTCGG TCGCTCAATT TCCCCGGGGA
GGTGAGACCG GATCGACCGA CCCCATCATA CCTACAACCG TCCCTGGGGT GTCCGCTCGC
CTCATAATCA ACGGGACGCC TGCGACAACC ACAAACTACA GTCCACCCGT CGTCATTACA
CGCTCAATGG AGGTGCAACT ACTCGCTGAT GGGAGTGGCG TACACAGCGG TAAACTGGGC
GGCGCAGCCA GCGGCCAGGA ATACTTCCTG CTGGGAATCA CGCGGCCGTA CGACGGCCTG
AAACTGAATC TAGGCATAAA CCTAAGGGGT ACTGTCACGT CGATCCCTGG TACGTGCAAC
GTGTCCACAG CACCGGTCAC CCTCCCACCC GTCCCATCAT CGCGGCTGCC CACCGTCGGG
TCGTCAAGCG GGGGGACAGC GTTCACGTTG AACGTAGAGC GGTGCCCAGC CGGGTACAAC
CGTGTGGGTT ACAGCCTATC GCAACCCAAC TACTCCCCCC AAACGCCTCC GGGAGTGCTT
CAGCCCTCAG CCAGCTCCTC CGCGCGCGGG GTGAATATCC AGCTCACGGA CTCGTCGGGT
TCAGGGCTGG AGCTCAATAG GTCGCATACT ATGACCGAAT ACAGCAAAAC CACGGGTGGT
TCATACAAAG TCCCTCTTCG CGCGGACTAC TACCGAACAG GATCTCGAAT CACCCCTGGA
ACCGTGACGT CCGACGTCAC CGTGGCTCTG GACTATCAAT GA
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| Protein sequence | MTTNCQSATL SPTRWGVAIL LLLPVTGETQ AATINAFGQA ISVPSTAPAG TVIARQAISP
NEACASDRCE ITSVAQFPRG GETGSTDPII PTTVPGVSAR LIINGTPATT TNYSPPVVIT
RSMEVQLLAD GSGVHSGKLG GAASGQEYFL LGITRPYDGL KLNLGINLRG TVTSIPGTCN
VSTAPVTLPP VPSSRLPTVG SSSGGTAFTL NVERCPAGYN RVGYSLSQPN YSPQTPPGVL
QPSASSSARG VNIQLTDSSG SGLELNRSHT MTEYSKTTGG SYKVPLRADY YRTGSRITPG
TVTSDVTVAL DYQ
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