Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6604 |
Symbol | |
ID | 6181827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010553 |
Strand | + |
Start bp | 94648 |
End bp | 96018 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641685369 |
Product | aminotransferase |
Protein accession | YP_001812274 |
Protein GI | 172064624 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.112591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACACGC TGAAACAGAA CGACATCGTT CACGTCCTTC ATCCGTACAC GAACCTGAGC CTGCATCGCG AAGTCGGGCC GATGGTCATC GAGCGGGGCG AAGGCGTGTA CGTGTACGAC ACCGACGGAA ATCGCTACAT CGAAGCACTG AGCGGCCTGT TCTGCGCATC GCTCGGATTC AGCGAATCGC GGCTGGCCGA TGCAGCGGAC CGCCAGATGC GCAGGCTGCC GTTCTATCAC GCGTTCGGTC ACAAGTCGTC CGAGCCGGTG ATCCTGCTGG CCGAGAAGCT CATCTCGATG GCACCCGTGC CGATGTCGAA GGTGTTCTTC GCGAACTCGG GATCGGAAGC CAACGACACC GCGGTGAAGC TGATCTGGTA TTACAACAAC GCGCTCGGGC GGCCGTCGAA GAAAAAGATC ATCGTCCGCA CGCGGGCATA CCACGGTGTG ACGGTCGCGT CCGCGAGCCT GACCGGCTTG CTGAACAACC ATCGCGACTT CGATCTGCCG ATCGACCGTA TACTGCATAC GGACTGCCCG CACTACTACC GTCATGCATT GCCCGGCGAA ACGGAGGAGC AGTTCGCGAC ACGCTGTGCC GATTCGCTCG AGCAACTGAT CCTGCGCGAA GGCCCCGACA CGATCGCCGC CTTCTTCGCC GAGCCGATCA TGGCGTCGGG CGGCGTGATC GTTCCGCCGG CCACCTACAT GGAAAAGATC CAGCGCGTGC TGAAGCGGTA CGACATCCTG CTCGTGGCCG ACGAGGTCAT CTGCGGCTTC GGCCGGACCG GCAACATGTT CGGGTCCGAA ACCTTCGGCA TGCAACCCGA CATGATCGTC GTCGCCAAGC AATTGTCCGC CGGCTACCTG CCGATCTCGG CGCTGATGGT CAACGATGCA ATCTATCGCG GGCTCGTGTC CGAAAGCGAG AAGATCGGCA CCTTCGGCCA CGGCTTCACG TACAGCGGCC ATCCCGTGTG CGCGGCCGTC GCGCTCGCGA CGCTGCGCAT CTACGAGGAG GACGGCGTGC TCGAGCACGT GCGCGGCGTG ATTCCGCATT TCCAGCAGCG CGTGGCCGAT CTCGCCGCGC ATCCGCTCGT GGGCGAGGCG CGCGGCGCCG GGCTCCTCGC GGCCGTCGAA CTGGTTGCCG ACAAGGCGAC GAAAACGCCG TTCCCGCAGT CCGACGGCGT CGCGGTCTAT GCCGGGGAAC GGGCGCTGAC GCATGGCGTG ATCACGCGTG CGCTGGGCGA CACGTTCAAT TTTTGCCCGC CGCTGATCAT CACGCACGAC GAAATCGATC AGTTGTTCGA TGCATCGAAG CTGGCGCTGG ACGATACGCT CGCGTGGCGT CGCTCGCTAG CCCAACGTTG A
|
Protein sequence | MHTLKQNDIV HVLHPYTNLS LHREVGPMVI ERGEGVYVYD TDGNRYIEAL SGLFCASLGF SESRLADAAD RQMRRLPFYH AFGHKSSEPV ILLAEKLISM APVPMSKVFF ANSGSEANDT AVKLIWYYNN ALGRPSKKKI IVRTRAYHGV TVASASLTGL LNNHRDFDLP IDRILHTDCP HYYRHALPGE TEEQFATRCA DSLEQLILRE GPDTIAAFFA EPIMASGGVI VPPATYMEKI QRVLKRYDIL LVADEVICGF GRTGNMFGSE TFGMQPDMIV VAKQLSAGYL PISALMVNDA IYRGLVSESE KIGTFGHGFT YSGHPVCAAV ALATLRIYEE DGVLEHVRGV IPHFQQRVAD LAAHPLVGEA RGAGLLAAVE LVADKATKTP FPQSDGVAVY AGERALTHGV ITRALGDTFN FCPPLIITHD EIDQLFDASK LALDDTLAWR RSLAQR
|
| |