| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6488 |
|---|
| Symbol | |
|---|
| ID | 6182406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 1111009 |
|---|
| End bp | 1111455 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641689607 |
|---|
| Product | protein of unknown function DUF861 cupin_3 |
|---|
| Protein accession | YP_001816466 |
|---|
| Protein GI | 172065754 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGAT ACGCCCTCGC AGCGCTGCTG TCATTCAGCG TCATGACTGC GGTCGACGCG
CACGCCGAAA CGATCAAGCC GATCAAGGCG TCAAGGTCCG ACCTTGCCGG TGCGATATTC
AATCGCGCCG ACGCCGTGAA AAAAGACGAA GGTGGCGAAA CGAGCGCGGA CGTCGCGACG
TTCACGTCGA CCGACAACGC TTACCAGACC GGCGTGTATC GATCCGGCCC GTCGCATGAG
GAAATCAAGG GCCCGCACGG GCTGCCGTAC AACGAATTCC TGTACTTTCT TTCAGGCAGC
GTGAAGCTCA CGTCGTCGGA CGGTTCGGTG ATGCTCGTGA AGACCGGCGA GGCCGTCACG
CTTCCGAAGG GATGGACCGG ACATTTCGAC ACGCCGGGCT ATACGAAGCT CTACGTGACC
TACAACCCCG ACGACAGGAA AAAATAG
|
|---|
| Protein sequence | MSRYALAALL SFSVMTAVDA HAETIKPIKA SRSDLAGAIF NRADAVKKDE GGETSADVAT
FTSTDNAYQT GVYRSGPSHE EIKGPHGLPY NEFLYFLSGS VKLTSSDGSV MLVKTGEAVT
LPKGWTGHFD TPGYTKLYVT YNPDDRKK
|
|---|
| |