| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6465 |
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| Symbol | |
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| ID | 6182559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 1087442 |
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| End bp | 1088632 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689584 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001816443 |
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| Protein GI | 172065731 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.592241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.571031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAC GCCTTTTCAC CGCATGCATT GCCGCCGTGA TCGGCTGCGC CACGCTGCCC
GCCGCTCACG CCCGCACCTA TATCGCGCCG ACGACGTCGC TCGGCAAAGG CGCCTACGTC
CATCAGTTCG TGCTGCGCGA CCCGGTCACG CACCAGCCGC TGCCGAATGC GCGCTACCGG
CTGTTCCTGC CGGGGCAGGT CATCGCGGGC CTGCCGGTCA AGCCGGGCCA GCACGACAGC
GTGGTCTTCG GCACGACCGA CGACGCCGGC CGCACCGTGC GGATCCGGCT GCCGAAATCG
CATCCGCAGA AGCAGTGGGT GTTCAACCCG GTCATCGGCG ACGGCGACCT GGGCGAATCG
TTCCGGCTCG TCAATGCGGG CGGCGACGCG CCGCTGCGCG GCTTCCCTTA CCTGCTGGAC
GTGGAACACG AATATCTGGC GTGCGGCCAC TCGGACGCGA ACGGCTACAC GTACTACGCG
CAGTCACGCA CGCCGCGCAC CGTCAATCTG TATACCGGGA TGCTGGGTGA TTCGGCCGAC
ACCGACTGGT GCGCGGGCCC CGGCGCGGCG ATTGCGAACA GCGCGAACGA ACCGGGCGCG
CCGGACCTGT ACACGCAATA CCTCGGCAGC CTGGTCGCCA ACGGCGACCG GATCGGCAGC
GAGTTGCGCC AGCAGATCGT CATCAAGCTG CTGTCGCTCG CGACCGAAGA ACGTGACGCC
GACCGCGTGG CCGCCGTGCT CGACCTCGGC GAGATCCCCG ACGACCGCCT GAACGATACC
GGCTATCGGC TCGTGGACGC GGGCGTCGCA GTCGATCGCG GGCTCGCGAT GATCGACGCG
CATCTCGCGA AAGCGCCCGA CGATGCGTAC GCGCTCGACA GCAAGGGTTG GGCGCTGTAT
CGGCTCGGCC GCAACGACGA AGCGCTCACG TGGTTCGACC GCTCGATCGC GATCTTCGAG
AAAAATGGTG ACGGCGACAG CGACACGCGC GAAGCGTGGG CGACCGGCCT GACGCACAAG
GGCGAGGTGC TGTGGAAGCT GGGCCGCCAG GATGAAGCGC GCGCTGCGTT CGCGCAGGCG
AGGACGATTC AGCCGAAGAA CACGGAGCTG GCGGAAACGT TGAAGCGGCT GAATGTGCAG
GAAAAGCCTG CCGAGGCCGG TGCGTCGGCA TCCGGTACGA CGGGAACATG A
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| Protein sequence | MTSRLFTACI AAVIGCATLP AAHARTYIAP TTSLGKGAYV HQFVLRDPVT HQPLPNARYR
LFLPGQVIAG LPVKPGQHDS VVFGTTDDAG RTVRIRLPKS HPQKQWVFNP VIGDGDLGES
FRLVNAGGDA PLRGFPYLLD VEHEYLACGH SDANGYTYYA QSRTPRTVNL YTGMLGDSAD
TDWCAGPGAA IANSANEPGA PDLYTQYLGS LVANGDRIGS ELRQQIVIKL LSLATEERDA
DRVAAVLDLG EIPDDRLNDT GYRLVDAGVA VDRGLAMIDA HLAKAPDDAY ALDSKGWALY
RLGRNDEALT WFDRSIAIFE KNGDGDSDTR EAWATGLTHK GEVLWKLGRQ DEARAAFAQA
RTIQPKNTEL AETLKRLNVQ EKPAEAGASA SGTTGT
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