| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6464 |
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| Symbol | |
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| ID | 6182558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1083244 |
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| End bp | 1087089 |
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| Gene Length | 3846 bp |
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| Protein Length | 1281 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689583 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_001816442 |
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| Protein GI | 172065730 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.692114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.779302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCTTT ACAACCGGTA TTTCACCTCC TTAAATAATC AGGGTCTGCG AACAGACCGG
AAAAACGAGA TCCCCATGAG CCATTTCCTG GACAGATTGC GTTATTTCTC CACCACGAGG
CCGACCTTCT CCGACGGACA CGGCGCCGTC ACCGACGAAG ACCGCAAATG GGAAGACGGC
TACCGGATGC GCTGGCAGCA CGACAAGATC GTCCGTTCGA CTCACGGGGT GAACTGCACG
GGCTCGTGCT CGTGGAAGGT CTACGTCAAA GGCGGGATCG TCACCTGGGA AACCCAGCAG
ACCGATTACC CGCGCACGCG CCCCGACATG CCGAACCACG AACCGCGCGG CTGCTCGCGC
GGTGCTTCGT ACTCCTGGTA TCTGTATAGC GCGAACCGTC TGAAGCATCC GATGGTGCGC
AGCGCGCTGG TGAAGCTGTG GCGCGAACGC CGCCGCACGC TCGGCGCCGT CGACGCGTGG
CGCTCGATCG TCGAGGACGA CGACGCGCGG CGTTCGTACC AGAGCCGGCG CGGGCTCGGC
GGCTTCGTGC GCGCGAGCTG GGACGAGGTC AACGAGATCG TTGCGGCCGC AAACGTTTAC
ACGGTCGAGC GGTACGGGCC CGATCGCGTG GTCGGCTTCT CGCCGATCCC GGCGATGTCG
ATGGTGTCGT ATGCGGCCGG TTCGCGCTAC CTGTCGCTGA TCGGCGGCGT GTGCCTGAGC
TTCTACGACT GGTACTGCGA CCTGCCGCCC GCGTCGCCGC AGACGTGGGG CGAGCAGACC
GACGTGCCCG AATCGGCCGA CTGGTACAAC TCGACGTTCA TCATGATGTG GGGCTCCAAT
GTCCCGCAGA CCCGCACGCC CGACGCGCAC TTCCTCGTCG AGGCGCGCTA TCGCGGCACC
AAGGTCGTGT CGGTGTTCCC CGACTACGCG GAAGGCGCGA AGTTCGGCGA CCTGTGGCTG
CATCCGAAGC AGGGCACCGA CGCGGCGCTC GCGCTCGCGA TGGGGCACGT GATCCTGAAA
GAGTTCCACC TGGCCGGCAA GAGCGACTAC TTTATCGACT ACTGCAAGCG CTACACCGAC
ATGCCGTGCC TCGTGCGCCT CGTGCCGCAC GGCGACGGCT ACGTGCCCGA GCGTCTCGTG
CGCGCATCCG ACTTCGACGA CGCGCTCGAC GAAGCCGCGC ACCCGGACTG GAAGACCGTG
ATGATCGACG ACGCGACGGG CGAATTCGTC GTGCCGGTCG GTTCGGTGGG CTTTCGCTGG
GGACAGCAGG CGGACGCGGA CAAGGGCAAG TGGAACCTGC GCGGCGAGAC GTCGAAGGGC
GCGACGCTGT CGCCGCGGCT GTCCTGCACG GCCGAGCACG ACGACGTGGT CGACGTGCTG
TTCCCGTACT TCGGCAACCA GCCGCATGCG CACTTCAACT CGACCGACCA CGGCTCCGAG
CTGTCGCGCC GGATCGGCGT GCGGCGCATC GCGACCCGCG ACGGCGAGAT GCTGGTCGCG
ACCGTCTACG ACCTGTTCGT CGCGAACTAC GGGCTCGACC AGGGGCTGGG CGGGCGCGAC
GTGGCCGCGA GCTACGACGA CGATCTGCCG TATACGCCGG CATGGCAGGA AACGATCACC
GGCGTGAAGC GCGCGGACGT GATCTCGGTC GCGCGGCAGT TCGCGGAGAA CGCGCACAAG
ACGCAAGGCA AGTCGATGGT GATCATCGGC GCGGGGATCA ACCACTGGTT CCACATGGAC
ATGTCGTACC GCGCGATCAT CAACATGTTG ATCATGTGCG GCTGTATCGG CAAGCCGGGC
GGCGGCTGGT CGCATTACGT GGGCCAGGAG AAGCTGCGCC CGCAGACGGG CTGGACCGCG
CTCGCGTTCG CGCTCGACTG GAACCGGCCG CCGCGGCACA TGAACGCGAC GTCGTTCTTC
TACGCGCACA CCGACCAGTG GCGCTACGAC ACGATGGACC CGAGCGCGCT GCTGTCGCCG
CTCGCCGACA GGACGCAGTT CCATGGCTCG CCGATCGACT ACAACGTGCG CGCGGAGCGG
ATGGGGTGGC TCCCGTCCGC GCCGCAGCTC GCGGTGCATC CGCTGAAGGT CGGCGCGAGT
CTCGGCGATG CAGCTGAAGC CGGTGCCGAC GTCGCCCGGC AGCTGAAGGC CGGCACGCTG
CGGATGGCGT GCGAGGATCC GGACGCACCG GACAACTTCC CGCGCAACCT GTTCGTGTGG
CGCTCGAATC TGCTCGGCTC GTCGGGCAAG GGGCACGAGT ATTTCCTGAA GCATCTGCTC
GGCACGACCA ACGGCGTGCA GGGCGAGGAC CTTGGCGCGA CGGGCGGCGC GCGTCCCGAG
GAAGTGAAGT GGCACGACGA CGCGCCGCGC GGCAAGCTCG ACCTGCTCGT CACGCTCGAC
TTCCGGATGT CGACCACATG CATGTATTCG GACGTCGTGC TGCCGACCGC GACGTGGTAC
GAGAAGGACG ACATGAACAC GTCCGACATG CATCCGTTCA TCCATCCGCT GTCGGCGGCG
GTCGATCCCG CATGGGAATC GAAGAGCGAC TGGGAGATCT TCAAGGGAAT CGCGAAGCGC
TTCTCCGAGC TGTGCGTCGG GCATCTCGGC GTCGAACGCG ACGTCGTGCT CGCACCGATC
GCGCACGACA CGCCGGGCGA ACTCGCGCAG CCGTTCGACG TGCACGACTG GAAGCGCGGC
GAATGCGAGC CGGTGCCGGG CCGCACGATG CCGGCGGTGA TCGCCGTCGA GCGCGACTAT
CCGAACACCT ATGCGCGCTT CACGTCGCTC GGGCCGCTGA TGGACAAGCT CGGCAACGCG
GGCAAGGGCA TCGGCTGGGA TACGAAGGAC GAGGTGAAGC TGCTCGGCGA ACTGAACTAC
ACGGTCGCCG CCGGTGCCGC GCAGGGGCGC CCGCGCATCG ACACCGCGCT CGACGCGGCC
GAGGTGATCC TCGCGCTCGC GCCGGAGACC AACGGCGAAG TCGCGGTGAA GGCGTGGCAC
GCGCTGTCCG GCCTCACCGG CATCGATCAC ACGCATCTGG CCGTCGCGCG CGCGGACGAG
AAGATCCGCT TCCGCGACAT CCAGGCGCAG CCGCGCAAGA TCATCTCGTC GCCGACGTGG
AGCGGGATCG AATCCGAGCA CGTGTCGTAC AACGCCGGCT ACGTGAACGT GCACGAACTC
GTGCCATGGC GCACGCTCAC GGGCCGTCAG CAGCTGTACC AGGACCATCC GTGGATGCGC
GCGTTCGGCG AGTCGCTGTG CGCATACAAG CCGCCGATCG ATACGGGCAG CTACGAACAC
ATGATCGGCA AGCGGTCGAA CGGCAACCCC GAGCGCGTGC TGAACTTCCT GACGCCGCAC
CAGAAGTGGG GCATCCACAG CACCTACACG GACAACCTGC TGATGCTGAC GCTGTCGCGC
GGCGGCCCGA TCGTGTGGAT GTCGGAGGAC GACGCGAAGG CGATCGGCGC GGTCGATAAC
GACTGGATCG AATGCTACAA CTCGAACGGC GCGTTGTGCG CGCGGGCGGT CGTGAGCCAG
CGGATTCCAT CGGGGATGGT GATGATGTAC CACGCGCAGG AGAAGATCGT GAACACGCCG
GGCTCCGAGA TCACCGGCAC GCGCGGCGGC ATTCACAACT CGGTCACGCG CATCGCGCTC
AAGCCCACGC ACATGATCGG CGGCTATGCG CAGCTGTCGT ACGGCTTCAA CTACTACGGC
ACGGTCGGCT CGAATCGCGA CGAGTTCCTG ATCGTGCGCA AGATGAGCAG GATCGACTGG
CTCGACGGAG AAGAGCGCGC GGTCGAGCCG ACAACGCAAG CGGTGCGGGC GGGAGAAACG
TCATGA
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| Protein sequence | MVLYNRYFTS LNNQGLRTDR KNEIPMSHFL DRLRYFSTTR PTFSDGHGAV TDEDRKWEDG
YRMRWQHDKI VRSTHGVNCT GSCSWKVYVK GGIVTWETQQ TDYPRTRPDM PNHEPRGCSR
GASYSWYLYS ANRLKHPMVR SALVKLWRER RRTLGAVDAW RSIVEDDDAR RSYQSRRGLG
GFVRASWDEV NEIVAAANVY TVERYGPDRV VGFSPIPAMS MVSYAAGSRY LSLIGGVCLS
FYDWYCDLPP ASPQTWGEQT DVPESADWYN STFIMMWGSN VPQTRTPDAH FLVEARYRGT
KVVSVFPDYA EGAKFGDLWL HPKQGTDAAL ALAMGHVILK EFHLAGKSDY FIDYCKRYTD
MPCLVRLVPH GDGYVPERLV RASDFDDALD EAAHPDWKTV MIDDATGEFV VPVGSVGFRW
GQQADADKGK WNLRGETSKG ATLSPRLSCT AEHDDVVDVL FPYFGNQPHA HFNSTDHGSE
LSRRIGVRRI ATRDGEMLVA TVYDLFVANY GLDQGLGGRD VAASYDDDLP YTPAWQETIT
GVKRADVISV ARQFAENAHK TQGKSMVIIG AGINHWFHMD MSYRAIINML IMCGCIGKPG
GGWSHYVGQE KLRPQTGWTA LAFALDWNRP PRHMNATSFF YAHTDQWRYD TMDPSALLSP
LADRTQFHGS PIDYNVRAER MGWLPSAPQL AVHPLKVGAS LGDAAEAGAD VARQLKAGTL
RMACEDPDAP DNFPRNLFVW RSNLLGSSGK GHEYFLKHLL GTTNGVQGED LGATGGARPE
EVKWHDDAPR GKLDLLVTLD FRMSTTCMYS DVVLPTATWY EKDDMNTSDM HPFIHPLSAA
VDPAWESKSD WEIFKGIAKR FSELCVGHLG VERDVVLAPI AHDTPGELAQ PFDVHDWKRG
ECEPVPGRTM PAVIAVERDY PNTYARFTSL GPLMDKLGNA GKGIGWDTKD EVKLLGELNY
TVAAGAAQGR PRIDTALDAA EVILALAPET NGEVAVKAWH ALSGLTGIDH THLAVARADE
KIRFRDIQAQ PRKIISSPTW SGIESEHVSY NAGYVNVHEL VPWRTLTGRQ QLYQDHPWMR
AFGESLCAYK PPIDTGSYEH MIGKRSNGNP ERVLNFLTPH QKWGIHSTYT DNLLMLTLSR
GGPIVWMSED DAKAIGAVDN DWIECYNSNG ALCARAVVSQ RIPSGMVMMY HAQEKIVNTP
GSEITGTRGG IHNSVTRIAL KPTHMIGGYA QLSYGFNYYG TVGSNRDEFL IVRKMSRIDW
LDGEERAVEP TTQAVRAGET S
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