| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6427 |
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| Symbol | |
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| ID | 6182238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1036216 |
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| End bp | 1037754 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641689550 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001816409 |
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| Protein GI | 172065697 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.4914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGA CGGCCTTCAA CCCTCACCGT GAGGCATTTG AGTGCAAGCA TGAGGCTGAC
GTCGTTCCCC CAATCGATCC GGAGGCCGAT CGATGGAACC AGGAAGCGGT GGCGCGCACC
AGCTCGCTGC TGTGGCCGAA CCAGCGCGAT TACACGGGTG CTGTCGATTT GTGGGCGAAG
GCCGCTGAGC GAAAGCACTG GAAAGCGATG TTGAATCTGG CAAGTGCCTA TGCTGAGGGG
CAGGGCGTGG ATCGTGATGC GGAACGCGCA GTGCAGATCA CGGAACAGGC AATGAAACTT
GGCATTCCGG CCGCGTACGA TCTAATGGGT ACGTATTACA TGAACGGGAT GGGGGTGAAG
CAGGATGCGA GTAGAGCCTA TGCATTCTGG CAACTTGCCG CGGATATGGG CAGCCCGAGC
GCGATGGCAT ATTTGGGGGG CAAGATGGAC GCGCTCTATG ATGACCCAAA GGCAGGCTTT
TGGGGTAACC GCAAGATTGC CCTCCAAATG CTCGAATGCG CCGTCGCGCA GGGGAGCGGG
CTTGCAGCAT ATGAACTGGG GACGACGATC GTAGGTGATC GCGCCGAATT GAGCGAGAAC
AACGACCGCG CACTCAAAAC CCTACACGCC GGTGTGAAGT TTGGCAGCGC CCAGAGTGCC
GGATGGTTGA GTGCCTCGTT TGGCAAGGGT GATGCACTGG TCGGTCATGT GAAGGATGAA
GCACGTGCCG AACGCTACGG AATTCTCGCC GACCGCCTCG AGCGCGATCC GGACCTTCGT
CTGCCCAACC TGGACAAAGT GTTACCGTTG CCACCGTCCA AATTGCCCAA GTGGGACGGC
AACAAGGAAA CGCTGATCAA TGCGGCTAAG GCCGTGATGT CGGTGCCCGT GCCGCCTTCC
ACACCCGCCA TGCATCCGGT CGCGCTGCGT ACCGGTCGTG CGCATGTGCC CGATGGCTAC
ATGTTGCCGG AGAAGCCGCC CATCACCGTG CCTCCGCAAG CGGAAACCAC CGCTGCTCCG
GTCGGCGGCT ACTGGCTTGC GCAGCTCAAG TATCCGACTG CCGAACGTCA TTTCGCCTGG
AATCTGGCGC AGGTGCCGAT GCACTACAGC AAGGACGAAC TATTTGATCG GAGTCGCCCC
GGTCTTGTGC TGGAGGATGG CCGTATCTTC TTTCATTACA TCGGAGACGC GATTCCGATG
GCAGTACCAC AAGCGGGATC GGAACCCCGC GTGACGCAGG GCATCGCGCG CGCCGCGGAA
TATCCCGAGC CTGCGGTCCA GTGTCGGGGC ACACGCGCGT GCCCGGTGAC GGGCATCTGG
CAGGCCAGTG TGACCGAGAA CCATCCTCGG GCCGCGACGT TCAATCAGTG GTACCGCCAA
GCCTATGTCG CACAGGGTGA TGCGTTCCCT GATCCGCGGG ACATGCATCT GGATATTTCG
CCGACGGATG TGACCTGGAC GTGGTGGAAC CAAGCCAATC GCCTCGGATT CGCGAAACTG
CCGGAAGTCA GTGTCGGCAA CGCGTCCGGC GACGCCTGA
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| Protein sequence | MSLTAFNPHR EAFECKHEAD VVPPIDPEAD RWNQEAVART SSLLWPNQRD YTGAVDLWAK
AAERKHWKAM LNLASAYAEG QGVDRDAERA VQITEQAMKL GIPAAYDLMG TYYMNGMGVK
QDASRAYAFW QLAADMGSPS AMAYLGGKMD ALYDDPKAGF WGNRKIALQM LECAVAQGSG
LAAYELGTTI VGDRAELSEN NDRALKTLHA GVKFGSAQSA GWLSASFGKG DALVGHVKDE
ARAERYGILA DRLERDPDLR LPNLDKVLPL PPSKLPKWDG NKETLINAAK AVMSVPVPPS
TPAMHPVALR TGRAHVPDGY MLPEKPPITV PPQAETTAAP VGGYWLAQLK YPTAERHFAW
NLAQVPMHYS KDELFDRSRP GLVLEDGRIF FHYIGDAIPM AVPQAGSEPR VTQGIARAAE
YPEPAVQCRG TRACPVTGIW QASVTENHPR AATFNQWYRQ AYVAQGDAFP DPRDMHLDIS
PTDVTWTWWN QANRLGFAKL PEVSVGNASG DA
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