| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6410 |
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| Symbol | |
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| ID | 6182554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1016891 |
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| End bp | 1018315 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641689533 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001816392 |
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| Protein GI | 172065680 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.267118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.167167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCT ACGAGAAATT CGCGAACGAC ATAGAGAGAC TCATCCGGCA GCGCGTGTAT
CGACATGGCG ATCGTGTGCC GTCGGTACGG CAGGCGAGCC AGCAGCATCG GATCAGCATC
ACGACCGTGC TGCATGCGTA CCTGTTACTC GAAAGCCGCG GGCTGCTGGA AAGCCGTCCG
CAATCCGGCT ACTTCGTGAA CCTGCGTCGC GACGACAACC ACGCGCCGGT GCGCGAGCTG
CGGCCGTCGA AGCCGATCGC GATCTCGTCG TCAGTGGACA TGAGCCGGCT CGTGCTGTCG
ACGCTGCGCG CGATCGGCAC CGACGACGCG GTGCCGCTCG GCTCGCCGTA TCCGGACCCG
AGCCTGTTTC CGTTCGAGAA GCTGAACCGC TATGCGTACG CAGCGGGCCG CGACAAGTCG
TTGTGGGGCG TGACGGACGG GCTGCCGCCC GGCCATCCGC GCCTGATCCG GCAGATCGCG
CGACGCTACC TGGAAAACGG GATGTCGGTC GATCCGAACG AGATCATCGT GACGGTCGGC
GCGACTGAGG CGATCAATCT GTGCCTGCAG GCGGTTGCAA AACCGGGCGA CACGATCGCG
GTGGAGTCGC CGACGTTCTA CGCGATGCTG CACGCGATCG AACGGATGGG GATGAAGGCG
ATCGAGGTCG CGACGCACCC GGAATACGGA ATCGACATCG CGGCGCTGGC GGCCATTGCG
AAGTCGCAGC CGATCGCCGC GTGCATGGTG ATGCCGAATT TCCAGAACCC GCTCGGCTTT
CAGATGCCCG ACGAGCGCAA GCGCGAACTG GTTGAATACG CAACGAAAGC GGACATGCCG
ATCATCGAGA ACGGCGTGTA CAACGAATTG TATTTTGGCA ATGCCCACCC GAGCGCGCTG
AAGGCGTTCG ACCGCAACGG AATCGTGCTG CATTGCTCAT CGTTCTCCAA GAGCCTGACG
GCCGCCTACC GGATCGGTTG GGCATTGCCG GGCCGCTATC GCGAACAGGT CGAGAAGCTG
AAGTTCCTGA ACACGCTGGC GACGCCGTCG TTGCCGCAGC TCGCTATCGC CGAGTTTCTT
GAGCGAGACG GCTACGAGCA TCACCTGCGG CGGATTCGCA AGGCGTATGC GCAGCAGGCG
AACCTGATGC GAGCGATGGT GTCGCGGTTC TTTCCGGAAG GTACGCGCAT CTCGAGCCCG
GCGGGCGGCT ACGTGTTGTG GGTCGAGCTG CCGGCGCAGG TCGATGCGAT GCGCCTGTAC
CAGCTCGCGC TGGAGCAGGG CATCACGATC GGACCCGGCT ACATGTTCTC GATCGCGGAC
ACGTACCGCA ATTTCATCCG GCTGAACTAC AGCAGCCCGT GGTCGCCGGA GATCGAGCGA
GCGATCGTCA CCGTCGGCAA GCTCGCGGCG GCCTGCATGG ATTGA
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| Protein sequence | MKLYEKFAND IERLIRQRVY RHGDRVPSVR QASQQHRISI TTVLHAYLLL ESRGLLESRP
QSGYFVNLRR DDNHAPVREL RPSKPIAISS SVDMSRLVLS TLRAIGTDDA VPLGSPYPDP
SLFPFEKLNR YAYAAGRDKS LWGVTDGLPP GHPRLIRQIA RRYLENGMSV DPNEIIVTVG
ATEAINLCLQ AVAKPGDTIA VESPTFYAML HAIERMGMKA IEVATHPEYG IDIAALAAIA
KSQPIAACMV MPNFQNPLGF QMPDERKREL VEYATKADMP IIENGVYNEL YFGNAHPSAL
KAFDRNGIVL HCSSFSKSLT AAYRIGWALP GRYREQVEKL KFLNTLATPS LPQLAIAEFL
ERDGYEHHLR RIRKAYAQQA NLMRAMVSRF FPEGTRISSP AGGYVLWVEL PAQVDAMRLY
QLALEQGITI GPGYMFSIAD TYRNFIRLNY SSPWSPEIER AIVTVGKLAA ACMD
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