| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6309 |
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| Symbol | |
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| ID | 6182750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 903251 |
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| End bp | 903925 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689436 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001816295 |
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| Protein GI | 172065583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.403057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTG AAACGTCGTT TCTGTTCGAT CTCGACGGCA CGCTCGTCGA CAGCGTCTAT
CAGCACGTGC TCGCGTGGAA GGAAGCGCTC GACGCCGAGG GCATCGAGCT GTCGGTGTGG
CGCATCCACC GCAAGATCGG GATGAGCGGC GGCCTGTTCC TGAACCAGCT GCTGCGCGAG
ACGGCCGGCG ACATCGACGC CGAGCGCGTC GAGCGGCTCG CGCGGCTGCA CGCGGCCGCG
TACCAGCGGC TGCGCGCGCA GGTCCGGCCG CTGCCGGGTG CACGCGAGCT GCTGGCCGCG
CTGACGAATG CCGGCATTCG CTGGGCGATC GCAACCAGCG GGCGGATGGA AACGGCCGCG
ATCAATCTGG AGGCACTCGG CGTCGATCCG GCGAAGAACG TGGTCGTCAC GCGCGACCAG
GTGAAGTACG CGAAGCCCGA TCCCGACCTG TTCCTGACCG CCGCCGCGAA ACTGAACGTG
CCGATCGAAC ATACGGTCGT GGTCGGCGAC AGCATCTGGG ACATGCTCGC CGCGAGCCGC
TGCCGGGCGC TGGGCGTCGG GCTGCTGTCG GGCGGTTACG GCAGCGACGA GCTCGAACGC
GCGGGCGCGC TGCGCGTGTA TGACGATCCG GCGGATCTGC TGCGGCATCT GGATGAGATC
GCGGCGCGGC CGTAA
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| Protein sequence | MRIETSFLFD LDGTLVDSVY QHVLAWKEAL DAEGIELSVW RIHRKIGMSG GLFLNQLLRE
TAGDIDAERV ERLARLHAAA YQRLRAQVRP LPGARELLAA LTNAGIRWAI ATSGRMETAA
INLEALGVDP AKNVVVTRDQ VKYAKPDPDL FLTAAAKLNV PIEHTVVVGD SIWDMLAASR
CRALGVGLLS GGYGSDELER AGALRVYDDP ADLLRHLDEI AARP
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