| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6308 |
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| Symbol | |
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| ID | 6182749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 901873 |
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| End bp | 903057 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689435 |
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| Product | sugar efflux transporter |
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| Protein accession | YP_001816294 |
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| Protein GI | 172065582 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.260956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.44314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCC CGGACGCCGT CAGTTCCGAA CAGTCGTGGT GGGGCGTTCT GGCCCTGGCA
CTCACTGCCT TCATCTTCAA TACCACCGAA TTCGTGCCCG TCGCGCTGCT GAGCGCGATC
GGCGACAGCC TGCAGATGCA GCCGACCGCC GTCGGCCTGA TGCTGACGAT CTACGCGTGG
GCCGTCGCCG TCGTGTCGCT GCCGCTGACG TTCGTCACGC GGCACGTCGA GCGCCGCAAG
CTGCTGAGCT GCGCGCTGCT GGTGTTCATC GGCAGCCATG TCCTCACCGG CGTCGCGTGG
AATTTCACGG TGCTGATGCT TGGCCGGCTC GGCATCGCGT GCGCGCATGC GGTGTTCTGG
TCGATTTCCG TCCCGCTGGC CGTGCGGCTC GCGCCGAGCG ACCGCAAAAG CCGCGCGCTC
GGCCTGCTCG CGATGGGCAC GGCGACCGCG ATGGTCGCCG GCATTCCGCT CGGGCGCGTG
ATCGGCGAGG CGCTCGGCTG GCGCGTCACG TTCCTCGTGA TCGGCGGCGC GGCGGCCGTC
GCGTTGCTCG CGCTGCGCAT GACGCTGCCG ACGCTCCCCA GCCAGGGCGC CGGCTCGCTC
GCGAGCATCG GCACGTTCCT GCGCAAGCCG GCGCTGGTGG CGCTGTACGC GATCACCGTG
CTGGTGATCT CCGCGCACTT CACGTCGTAT ACGTACATCG AGCCGTTCGT GCAGAGCGTC
AATCATGCGA GCAGCAGCCG GATTACCTAC GTGCTGATCC TGTTCGGCGT CGCCGGCGTG
CCGGCCGCGC TCTGCTTCAA TCGCGTGTTT CCGGAGCGGC CGGCCGATTT CCTGCTCGCG
TCGATCATCG CGTTGTCGGC CTGTCTGCTG ATCCTGTTCC CGAGCGCGCT GAACATCGTC
ACGCTGTCCG TTCACACGCT GGTGTGGGGC GGCGCGATCG TCTGCTTCGG TCTCGCGATG
CAGGCGTGGG TGCTGAAGCT GGCGCCCGAG GCGACCGATC TCGCCGTGTC GATTTTTTCC
GGGCTGTACA ACGTCGGGAT CGGCGCCGGC GCGCTGCTCG GCAACCATAT CGCCGGGGCG
TTCGGGCTGC CGTGGATCGG CACGTTCGGC GGGGTGGTGG GGATCTTCTC GGCCGGGATC
GCGTGGGCCG CGTTGCGGCT GCATGAGCGG CGGGCGGTGG CGTAG
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| Protein sequence | MATPDAVSSE QSWWGVLALA LTAFIFNTTE FVPVALLSAI GDSLQMQPTA VGLMLTIYAW
AVAVVSLPLT FVTRHVERRK LLSCALLVFI GSHVLTGVAW NFTVLMLGRL GIACAHAVFW
SISVPLAVRL APSDRKSRAL GLLAMGTATA MVAGIPLGRV IGEALGWRVT FLVIGGAAAV
ALLALRMTLP TLPSQGAGSL ASIGTFLRKP ALVALYAITV LVISAHFTSY TYIEPFVQSV
NHASSSRITY VLILFGVAGV PAALCFNRVF PERPADFLLA SIIALSACLL ILFPSALNIV
TLSVHTLVWG GAIVCFGLAM QAWVLKLAPE ATDLAVSIFS GLYNVGIGAG ALLGNHIAGA
FGLPWIGTFG GVVGIFSAGI AWAALRLHER RAVA
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