| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6295 |
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| Symbol | |
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| ID | 6182736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 887530 |
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| End bp | 887922 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641689422 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001816281 |
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| Protein GI | 172065569 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.114963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00251827 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGAAC GCGAAGCGAT CATTCCGGCC GGAATGGAAG ACGTGTACGA AAAAATCGGC
TATGCACCGG CGATCAAGGT CGGCGATACC GTCTACGTGT CCGGCCAGAT CGGCCGTGAC
GCCGCGATGC AACTGGTGGA AGACCGCGAA GCGCAGATCG TGCAGGCGTT CGAGAACCTG
AAGCGCGTGC TGGAGGCCGG CGGCGCCTCG CTCGACGACG TGGTCGACCT GACGACTTTT
CATACCGACA TGCGCGACCT GCCGCTGTTC ATGCAGGTGC GCGACCGCTA TTTCCATGCG
CATCCGCGGC CGGCGTGGAC GGCTGTCGGC GCGCACATGC TGGGCGGTTC GGCGGGTTAT
ATCGTCGAGA TCAAGGCGGT GGCGGTGCTG TAA
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| Protein sequence | MREREAIIPA GMEDVYEKIG YAPAIKVGDT VYVSGQIGRD AAMQLVEDRE AQIVQAFENL
KRVLEAGGAS LDDVVDLTTF HTDMRDLPLF MQVRDRYFHA HPRPAWTAVG AHMLGGSAGY
IVEIKAVAVL
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