Gene BamMC406_6114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6114 
Symbol 
ID6182316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp694147 
End bp694920 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID641689242 
ProductABC transporter related 
Protein accessionYP_001816101 
Protein GI172065389 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG AAATCCGTTT GTCTGTCAAC GGCGTGAACA AACGCTTCGG CGGGCTTCAG 
GCACTGTCCG ACGTCGGCCT GGAGATCAAG GAAGGCGAGA TCTACGGGCT GATCGGCCCG
AACGGCGCCG GCAAGACGAC GTTCTTCAAC GTGATCACGG GCCTCTACAC GCCGGACTCC
GGCGAGTTCA AGCTCGATGG CACGGAATAC AAGCCGACCG CGGTGCACCA GGTCGCGAAG
ACGGGCATCG CGCGCACGTT CCAGAACATC CGCCTGTTCG GCGGGATGAC CGCACTCGAG
AACGTGATGG TGGGCCGCCA CGTGCGCACC AAGCATGGGC TGCTGGGCGC GGTGTTCCAG
ACACCGGCCG AGCGCAAGGA AGAGCGCGAG ATCAAGGAGC GTGCGATCGA GCTGCTCGAA
TACGTCGGCG TGCTGCAGTA CGCGGACTAC ACGTCGCGCA ACCTGTCGTA CGGCCACCAG
CGCCGTCTGG AAATCGCGCG GGCCCTTGCC ACCGACCCGA AGCTGCTCGC GCTCGACGAG
CCGGCGGCCG GGATGAACGC GACCGAGAAG GTCGAACTCA CGCGGCTGCT CGACAAGATC
CGTTCGGACG GCCGCACGAT CCTGTTGATC GAGCACGACG TGAAGCTCGT GATGGGTCTG
TGCAACCGGA TGACGGTGCT CGATTACGGC AAGGTGATCG CCGAGGGTCT GCCGCAGGAC
GTGCAGAAGA ATCCGAAGGT GATTGAGGCA TATCTCGGCG CAGGGGTGCA CTGA
 
Protein sequence
MNKEIRLSVN GVNKRFGGLQ ALSDVGLEIK EGEIYGLIGP NGAGKTTFFN VITGLYTPDS 
GEFKLDGTEY KPTAVHQVAK TGIARTFQNI RLFGGMTALE NVMVGRHVRT KHGLLGAVFQ
TPAERKEERE IKERAIELLE YVGVLQYADY TSRNLSYGHQ RRLEIARALA TDPKLLALDE
PAAGMNATEK VELTRLLDKI RSDGRTILLI EHDVKLVMGL CNRMTVLDYG KVIAEGLPQD
VQKNPKVIEA YLGAGVH