| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6089 |
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| Symbol | |
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| ID | 6182200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 675220 |
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| End bp | 676632 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689219 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001816078 |
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| Protein GI | 172065366 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC TTTCCATTGG CCTGGATCAC TCCAGACGCA CGTCGCTGTC CGCGCAGATC
TACAGCGCGA TCCGCGACGC GATCGAGTCC GGCAAGCTTG CTTCGGGCGC GCGGCTGCCT
TCCTGGTCGG ATCTGGCCGC CCAGCTCGGC GTATCGCGGG GCACCGTACG CGCCGCTTAC
GAGCGTCTGA TCGACGAGCA ATTCGCGATC GGTCTCGGGG CGGCCGGCAC GCGGGTCGCG
GAGCGTCCCG CCGTGCCGAT CGCGGCCGGC TGGTCGCCGG AAGCGCCGCC CCTGCCGGAT
CTGTTCGACG CGTTCGGCGC GGCGCCTCGC GCGTTTCAAA TGGGCGTGCC GTCACAGGAC
GCGTTTCCGT TCAAGCTGTG GTCGCGCATC CTCGCGCGTG CGGCGCGCCG GGCCTCCGCA
GCGCCGGTCG GCTACCCCGA TCCGCGCGGC GAACCGGACT TGCGCAGGGA AATCGCCGCC
TATCTGGGTG TCGCCCGCGG TCTTCGTTGC AGTCCCTCGC AGGTCTTCGT CACGGCCGGT
TTCTCAGGCG CACTGAGCCT CGCGATTCGC GGGCTCGGAA TGGAAGGCCG GCAAGCGTGG
ATCGAAGACC CCGGCTTTCC GCTCACGCGT ACCGCGCTCG GGCTGGCTGG CATGACCGTG
ACGGCCGTGC CGGTGGACGG CGACGGCCTC GATGTGGATG CAGGCATCCG GCAGGCGAAG
GAAGCGGCGC TTGCCGTGGT CACGCCCGGC CAGCAGGCGC CGCTCGGGAT GACGATGTCG
CTCCCTCGGC GGATTGCACT GCTCGCCTGG GCCCGACAGA ACGATGCGCG GATCATCGAA
GACGACTACC TGAGCGAGCT GCAGCTGACC GGTCGGGCAG CGCCCGCGCT TGCGTCGATC
GATCAGGAGG GACGGGTTCT GCACGTCGGC AGTTTCAGCA AGACGATCAG CCCGGCGCTG
CGTCTCGGCT TTCTCGTGGT GCCGCCGGAC ATGACGCGCC GCTTCGCCGA TATCGCGGCG
TGCCTCGCGC CCGCGCCGGC GGCGTGCATC CAGCATGCCG TCACCGAGTT CATGCACGAC
GGGCACTATC TGCGCCATTT ACGTCGTATG AAACGTCTCT ACGCATCGCA TCGGGAGACC
CTGCTTCGTT GTCTGAATGA ACTGGGCTCG AACGCGATCC AGATCCGGGC CACTGCCGGC
ATGGCCGTCG TGACGACGCT GCCCGCGCAG GTGTCGGATG TCGATATCGC GTTGCGGGCG
CGCGCGTTCG GGCTGGCCCC GGTCCCGCTT TCGCCGTGGT ACACGGGCAC GCCGCGGCAA
CAGGGCTTGC TGCTCGGCGT GACGAACCTG ACCGAGCGCA CGCTCGCCAC CGACTGTTCC
CGCCTGCTGG AGCTCGTTCG CGCGAGCTCC TGA
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| Protein sequence | MTTLSIGLDH SRRTSLSAQI YSAIRDAIES GKLASGARLP SWSDLAAQLG VSRGTVRAAY
ERLIDEQFAI GLGAAGTRVA ERPAVPIAAG WSPEAPPLPD LFDAFGAAPR AFQMGVPSQD
AFPFKLWSRI LARAARRASA APVGYPDPRG EPDLRREIAA YLGVARGLRC SPSQVFVTAG
FSGALSLAIR GLGMEGRQAW IEDPGFPLTR TALGLAGMTV TAVPVDGDGL DVDAGIRQAK
EAALAVVTPG QQAPLGMTMS LPRRIALLAW ARQNDARIIE DDYLSELQLT GRAAPALASI
DQEGRVLHVG SFSKTISPAL RLGFLVVPPD MTRRFADIAA CLAPAPAACI QHAVTEFMHD
GHYLRHLRRM KRLYASHRET LLRCLNELGS NAIQIRATAG MAVVTTLPAQ VSDVDIALRA
RAFGLAPVPL SPWYTGTPRQ QGLLLGVTNL TERTLATDCS RLLELVRASS
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