| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5982 |
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| Symbol | |
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| ID | 6181934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 534932 |
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| End bp | 536008 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689112 |
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| Product | poly(3-hydroxybutyrate) depolymerase-like protein |
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| Protein accession | YP_001815971 |
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| Protein GI | 172065259 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.221901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGA AAAAAACCAG CCTCTGGCTA CGGCCATTCG ACCTGTTTTC CGCCGCGACG
AGCACGCGAC CGAAACGCAA GACAGCCAAA CCGGCGGCGT CGGCCAAACG CGCCGCCACT
GTACGGACCC CGCGCCGCAC CCGCGCGCCG GCGCCGGCCG CCCATCCGTC GCCGCGCCAC
GCACCGGGCA CCTGGCTGCG TTCGTTTCAT TCCGCGCGCC CGACCGCCGG CCGCCTCGTC
AACCATCTGG CGTACGCGCT GTACCTGCCC GCCGCCCCGG TAACGACCAC GAGCATGCCG
GTCGTCGTCA TGCTGCACGG CTGCAAGCAG ACCGCCGAGT CGTTCGCCGC GGGCACGCGC
ATATGCCGCG TCGCGGAGCG TGCCGGGTTT GCCGTGCTGT TCCCCGAACA GGCGAAGACC
GCGCACGCGC ATCGCTGCTG GAACTGGCAT GGCGATGCGT CGCAATCGGA GCTTCCGGCG
GTCGCGTCGC TGATCGACGC GATCGTGCAG GCGCGCGGGT TCGACCGCGA CCGGATCTAT
CTGGCCGGCA TGTCGGCCGG CGCCGGGCTG GCCGCGCAAC TGGCGATCGC GTATCCCGAG
CTGTTCGCGG CCGTCGGCCT GCATTCCGGC CCGGCCATCG CGCCGCCGTT GTCGACGATG
GCCGCGATGA GCCTGATGCG CCGCGGCCTG CGCGACGACC CGATACACGT GGTCGACGCA
TGCGTCGACG TGCGCGCGTA TCCGGGCATG CCCGCGCTCG TCATGCATGG CGGGCTCGAC
ACGGTCGTCG CCGAACAGAA CGCGCTGCAG CTCGGCGTCG CGTTCGCGCG GATCAATCGG
CTCGTCGACG AACACGGTGA ACTGCGCGTC GGCGAGCGGC ACACCTACAT GCATGACGAC
GCGGATTACA CGGACTATCT GCGCGGCGGC CGGGTGATCG TCCGCGTCTG CATCGTGCGC
CGCCTCGCAC ACGCGTGGAG CGGCGGCGAT CCGCGTGAAG CGTTCCACTC CGCGACGGGG
CCGGACGCGA CCGCGATGTT CTGGAATTTC TTTCGAAGGC GGCGGCGCAA GCGGTAG
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| Protein sequence | MPRKKTSLWL RPFDLFSAAT STRPKRKTAK PAASAKRAAT VRTPRRTRAP APAAHPSPRH
APGTWLRSFH SARPTAGRLV NHLAYALYLP AAPVTTTSMP VVVMLHGCKQ TAESFAAGTR
ICRVAERAGF AVLFPEQAKT AHAHRCWNWH GDASQSELPA VASLIDAIVQ ARGFDRDRIY
LAGMSAGAGL AAQLAIAYPE LFAAVGLHSG PAIAPPLSTM AAMSLMRRGL RDDPIHVVDA
CVDVRAYPGM PALVMHGGLD TVVAEQNALQ LGVAFARINR LVDEHGELRV GERHTYMHDD
ADYTDYLRGG RVIVRVCIVR RLAHAWSGGD PREAFHSATG PDATAMFWNF FRRRRRKR
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