Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5943 |
Symbol | |
ID | 6182190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 488187 |
End bp | 489461 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689074 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001815933 |
Protein GI | 172065221 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC GCCTTACCTT CAGCATTGCA GTCGGCATGA TCCTCGGTGT CGTCGCCGGT TATGCATGTC ACACGCACAT CACGGACCCG GCCACGCTCA AAACCGTCGC GGGCTATTTC TCGATCGTCA CCGACATCTT CCTGCGCCTG ATCAAGATGA TCATCGCGCC GCTGGTGTTC GTCACGCTCG TGTCCGGCCT GGCCGGCATG GACAGCGGCG AGGACGTCGG CCGCATCGGC CTGCGCTCGA TCGGGTGGTT CGTCTGCGCG TCGCTGGTTT CGTTGAGCCT CGGCCTCGTC ATGGCCAATG CGCTGCAGCC GGGCGCCGGC CTGAACCTCG CGGCATCCGG CGGCGAAGTC GGCACCGGCC TGAATACCGG CGCGCTGAAC GCGCGGGACG TGATCACGCA TGCATTCCCG ACCAGCCTGC TCGACGCGAT GGCGCGCAAC GACATCCTGC AGATCCTGGT GTTCTCGGTC TTTCTCGGCA TCGGGCTGAG CGCGCTGAAG CACGACAAGC GGGTCGGCGT CGTGATCCAG TCGATCGACG GCATGGTGCC GGTGATGCTG CGACTGACCA ACTACGTGAT GCGCGCGGCG CCGCTCGGCG TATTCGGTGC GATCGCCGCG TCGGTCACGC TGCGCGGGCT CGACGTGATC TATACGTACG GCAAGCTGAT CGGCGCGTTC TACCTCGGCT TGCTCGTCCT CTGGACGCTG CTGATCGGCG CCGGCTACGT GTTTCTCGGG CGGCGCGTCG GCAGCCTGCT GAAGGCCGTG CGCGAACCCG CGCTGATCGC TTTCTCAACG GCGAGCAGCG AGGCCGCCTA TCCGCGCCTG ACCGAGCAGC TCGAGCGGTT CGGCGTGGAC AAGAAGGTGG TGGGCTTCAC GCTGCCGCTG GGTTACGCGT TCAATCTGGA CGGCTCGATG ATGTATCAGG CGTTTGCCGC GATCTTCATC GCGCAGGCGT TCGGCGTGCA CATGCCGGTG TCGGAGCAGG TGTTCATGTT GCTGGTGCTG ATGTTGAGCA GCAAGGGGAT GGCGAGCGTG CCGCGCGGCT CGGTGGTCGT GGTCGCGGCG GTCGCGCCGA TGTTCCATCT GCCGGTGGCC GGCGTCGCGA TGATTCTCGC GATCGACCAG ATTCTCGATA TGGGCCGCAC GATGACGAAC GTGATCGGCA ACAGCGTGGC GACAGCGGTG ATCGCGCAGT GGGAGAGCCG GCGCACGGCG AAGTCGCAAG CCGCCGCCGT ATTCGATCAG CCGGAGAGCG CGTGA
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Protein sequence | MKNRLTFSIA VGMILGVVAG YACHTHITDP ATLKTVAGYF SIVTDIFLRL IKMIIAPLVF VTLVSGLAGM DSGEDVGRIG LRSIGWFVCA SLVSLSLGLV MANALQPGAG LNLAASGGEV GTGLNTGALN ARDVITHAFP TSLLDAMARN DILQILVFSV FLGIGLSALK HDKRVGVVIQ SIDGMVPVML RLTNYVMRAA PLGVFGAIAA SVTLRGLDVI YTYGKLIGAF YLGLLVLWTL LIGAGYVFLG RRVGSLLKAV REPALIAFST ASSEAAYPRL TEQLERFGVD KKVVGFTLPL GYAFNLDGSM MYQAFAAIFI AQAFGVHMPV SEQVFMLLVL MLSSKGMASV PRGSVVVVAA VAPMFHLPVA GVAMILAIDQ ILDMGRTMTN VIGNSVATAV IAQWESRRTA KSQAAAVFDQ PESA
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