Gene BamMC406_5940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5940 
Symbol 
ID6182187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp486278 
End bp486619 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID641689071 
Productsmall integral membrane protein 
Protein accessionYP_001815930 
Protein GI172065218 
COG category[S] Function unknown 
COG ID[COG5605] Predicted small integral membrane protein 
TIGRFAM ID[TIGR02229] caa(3)-type oxidase, subunit IV 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA CCGATTCCGC CGATCGACCC GACGCCGCGC ACGGCCAGCA GCATCCGATC 
GGCGTCTACC TGAAGATCTG GGGCCTGCTG TTCGTTCTGA GCACGTTGTC GTATCTGGTC
GACTACTTCC ACGTGCAGGG CGTGCTGCGC TGGGTGCTGA TCGTCGTGCT GATGATCGCG
AAGGCCGGGC TGATCGTGTC GATCTTCATG CACATGATGT GGGAGCGGCT GGCGCTGGTG
TACGCGATCC TGGTGCCGCC GCTGTGCCTG CTGGTGCTCA TGGTGCTGAT GGCCGCCGAA
GCGCATCACA CGTTCGGCAT GCGGGCACTC TTCTTTCACT GA
 
Protein sequence
MDHTDSADRP DAAHGQQHPI GVYLKIWGLL FVLSTLSYLV DYFHVQGVLR WVLIVVLMIA 
KAGLIVSIFM HMMWERLALV YAILVPPLCL LVLMVLMAAE AHHTFGMRAL FFH