| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5901 |
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| Symbol | |
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| ID | 6182484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 440675 |
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| End bp | 441799 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689032 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
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| Protein accession | YP_001815891 |
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| Protein GI | 172065179 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.630073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGA CACCCGCACC GACCCGGCCG TCCACGCCGC TGTGGCTGCT GGCCGAACTC
ACGTATCGCT GTCCGCTGCA TTGCGCGTTC TGCTACAACC CGGTCGATTT CGCGACGCAC
GGCACCGAAC TCGATACCGA CGCATGGCGC ACGGTGATCA GCGATGCGCG CGCGCTCGGC
GCCGCGCAGA TCGGCTTTTC CGGCGGCGAG CCGCTGCAGC GCGACGACCT TGAGGTGCTG
GTCCAGCATG CGCGATCGCT CGGTTTCTAT ACCAACCTGA TCACGTCGGG CGTGGGCCTG
AACGCCACGC GCATCGACCG GCTCAAGGCG GCCGGGCTCG ATCATATCCA GCTGTCGCTG
CAGGATTCGA CGCGCGAGCT GAACGATTTC CTGACCAGCA CGCGCACCTT CGACCTCAAG
CGCGACGTCG GACGGCTGAT CAAGGCGCAC GGCTATCCGA TGGTGCTGAA CTGCGTGCTG
CACCGATACA ACTTGCCGCA CGTCGGCCAG ATCATCGAGA TGGCGCTCGA CCTCGGCGCG
GATTTTCTCG AACTCGCGAA TACGCAGTAC TACGGCTGGG CGATGCTGAA TCGCGACCAG
CTGATGCCGA CCGCCGAACA GCTGCGCGAA GCCGAGGAAA CGGTCAACCG CTACCGCAAG
CTCGTCGGCG AACGATGCAA GATCCTGTTC GTCGTGCCCG ACTACTTCGA GCAGCGGCCG
AAGGCCTGCA TGAACGGCTG GGGCTCGGTA TTCCTTGGCG TCGCACCGGA CGGCACCGCG
CTGCCGTGCC ACGCCGCGCG CGGGTTGCCC GGCCTCGTGC TGCCGAACGT GCGCGACCGC
TCGCTGAAGG AGATCTGGTA CGACAGCGAC GCGTTCAACG CGTTTCGCGG CGACGGCTGG
ATGCGCGACC CGTGCCGCAC CTGCGACGAG CGCCATACGG ATCATGGCGG GTGCCGGTGC
CAGGCGTACA TGCTGGCGGG CGATCCGGCG GAGGCCGACC CGGTGTGCGC GAAGTCCGCA
CATCACGGCC AAGTCGAGCA GGCCGTGCAA TTCGCGCGGC GGGCGGGGCG GCAGGACGAG
CGTCCGCTGA TCTTTCGCAG TGTGGCTAAT TCGGTCGGGC GCTGA
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| Protein sequence | MDTTPAPTRP STPLWLLAEL TYRCPLHCAF CYNPVDFATH GTELDTDAWR TVISDARALG
AAQIGFSGGE PLQRDDLEVL VQHARSLGFY TNLITSGVGL NATRIDRLKA AGLDHIQLSL
QDSTRELNDF LTSTRTFDLK RDVGRLIKAH GYPMVLNCVL HRYNLPHVGQ IIEMALDLGA
DFLELANTQY YGWAMLNRDQ LMPTAEQLRE AEETVNRYRK LVGERCKILF VVPDYFEQRP
KACMNGWGSV FLGVAPDGTA LPCHAARGLP GLVLPNVRDR SLKEIWYDSD AFNAFRGDGW
MRDPCRTCDE RHTDHGGCRC QAYMLAGDPA EADPVCAKSA HHGQVEQAVQ FARRAGRQDE
RPLIFRSVAN SVGR
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