| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5800 |
|---|
| Symbol | |
|---|
| ID | 6182050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 331496 |
|---|
| End bp | 332512 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641688935 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001815794 |
|---|
| Protein GI | 172065082 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTAG CCTTGCTGGA GGCCAGCCAT TGGCATATCC CGCTCTACCT TGATGCGCTT
GAAGCGTCAG GAATCAAGGT CGTTGCCGTG TCGGATGCGG AACATGTGAA AGGCGAAGCG
ATCGCCACCC GATTCGGGAG CAAGTTGTAC TCGTCGTCCT ATGAGTTGCT GGAGCGCGAG
CAGGTCGATT TCGCTTTTGT ATTCGGTCGG CATTCTGAAA TGCCGGCGCT CGCTGAGGCG
GTGATCGCAC GGAACATTCC GTTCGCACTG GAAAAGCCGT GCGGCGTGAA TATGGCGCAA
GTTACCCGAC TTCGCACACT GACCGAGAAA GCCAATCTTT ATTGCGCGGT GCCGTTGATC
TTCCGAATGA GCGAATTGCT TCGCTCGCTC GAAGACGCCG AGGGGCGCAT TCCATCGGAC
TTCAACTACA TGTCGTTCCG CTTCATTGTG GGCCCGCCCA GTCGCTATGA AGCCGCAGGT
TCCGGCTGGG CACTCGATCC CCTGTATTCC GGCGGTGGAT GCACGATCAA TGTGGCTACT
CACTTCATCG ACCTGTTCCG ATTGCTCACC GGCAAAGAAA TCGCCCGTGT CTCCGCCGTC
ATGAATTCAA GAACGCATCG AGGTGCCGTT GAGGACTACT CTATTTTGAC CATGCAGACC
GACGACGGCG TGATCGGCTC AATAGAGACG GGATACAGTT TTCCCAGCAC CGCCGACGAG
CAGCGCGAAT TCTCCTTTAC TCTTGCTTCG GACCGCATGT ACGCGAAATC TGGCTTGGAC
CGAATTGAGA TCCGTGACAG GGAAAATCTG TCTACCGGCA CGCGAAGCCG TCGCCTCCAG
CTCGAGACTG ACGTCTACTA CCCGTTATTT GTCAAGCGAG TGCTCGCTGA AAGCCAGACT
GGCGCAAAGC CGATTGCATC GTTGCGCGAT GCGGAGCTGA TGATGCAAGT CATGGACGCG
GCCTACGCCT CGGCTCGACA GGGGGGAGTA CCCCTTGATC TGGAAGCCGC TTCCTAG
|
|---|
| Protein sequence | MRVALLEASH WHIPLYLDAL EASGIKVVAV SDAEHVKGEA IATRFGSKLY SSSYELLERE
QVDFAFVFGR HSEMPALAEA VIARNIPFAL EKPCGVNMAQ VTRLRTLTEK ANLYCAVPLI
FRMSELLRSL EDAEGRIPSD FNYMSFRFIV GPPSRYEAAG SGWALDPLYS GGGCTINVAT
HFIDLFRLLT GKEIARVSAV MNSRTHRGAV EDYSILTMQT DDGVIGSIET GYSFPSTADE
QREFSFTLAS DRMYAKSGLD RIEIRDRENL STGTRSRRLQ LETDVYYPLF VKRVLAESQT
GAKPIASLRD AELMMQVMDA AYASARQGGV PLDLEAAS
|
|---|
| |