Gene BamMC406_5798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5798 
Symbol 
ID6182048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp329906 
End bp330358 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content63% 
IMG OID641688933 
Productcupin 2 domain-containing protein 
Protein accessionYP_001815792 
Protein GI172065080 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAACA AAGGCACGCC GCGTTACGAC GGCCCGCGAC AACTCGCGCA GTCCCTAAGC 
GCGTTTGCGC GGACCAGCGC GTCGGACACA CCCTGGAACA AGGACGGGCT GCGCGCAGAC
TCTGAATATC GCGACCTTGG GCTCGCCACT GCAACCAACG GTCGCATCGG AGCGAAGCAT
ATTCGCGCGC TTAAGCCGTT CACGGAGCCC ACCGGCTGGC ACTGGCATGA CATGACCGGA
CACTACCTGT ATGTGCTGCG CGGATCGGTC ACATTCCGAT TCGCCGGGGT CGAGGGAGAC
GTCACGCTCA GTGCCGGTGA CGGTCTGTCT CAGCCCGCCG GCGTTCCGCA CAACGTGATG
TGGCGCTCGG ACGACCTCGA AGTAATCGAG ATCAACGAGC CGGCCGTCTT CGGCACGTGG
GATCTCGCTG AGCCGCCGGA ACCGTGGAAG TAA
 
Protein sequence
MHNKGTPRYD GPRQLAQSLS AFARTSASDT PWNKDGLRAD SEYRDLGLAT ATNGRIGAKH 
IRALKPFTEP TGWHWHDMTG HYLYVLRGSV TFRFAGVEGD VTLSAGDGLS QPAGVPHNVM
WRSDDLEVIE INEPAVFGTW DLAEPPEPWK