Gene BamMC406_5792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5792 
Symbol 
ID6182042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp323349 
End bp324920 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content59% 
IMG OID641688927 
ProductAltronate dehydratase 
Protein accessionYP_001815786 
Protein GI172065074 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGA ATCTCGCCGA CACGTCCGTC CGAACCACCG CGTCAATGTC GGCTCGTGTC 
ATAAGACTCA ATCCTGCCGA CGATGTCGTT ATCGCGCTCG AACAGCTTGT GTCCGGCACC
GTGCTCGACA AGGAAGCAGT GACGGTCTCG GGACTGATTC CGCCCGGGCA CAAAGTAGCG
ACACGTGACA TCGGTCAGGG TGAGGCGGTA CACCGCTACG GCCAGGTAAT CGGCTTTGCG
AGTCGGCCGA TTCGCGCAGG GCAGCATGTA CACACCCACA ACCTCGCCAT GGGCGACTTT
GCGCGTGACT ACGCGTTCGG TCAGGCCGCG CGTCAGACCG TGCGCTCGAA CGGGCCCGCG
ACATTCCAGG GCATTGTTCG CGCAGACGGC CGAGTTGCCA CACGCAACTA CATCGGGATC
CTCACCTCGG TAAATTGCTC GGCTACGGTT GCGCGAGCCA TTGCCGATCA TTTTCGCCGC
GACATTCATC CAGATGAATT GGCCGCGTTC CCGAACGTCG ATGGCGTCGT GGCGCTCACA
CACGGTTCGG GTTGCGCGAT CGACTCTGAA GGCGATGGTC TGGCGATCTT GCAGCGCACG
CTTGGCGGCT ATGCCTGCCA CCCAAACTTC GCAAGCGTGC TGGTCATCGG TCTCGGCTGT
GAAACAAATC AAATTCCGCG ACTTCTCGAG ACGCAGGGAC TCCGGGAAGA CGACCGCTTG
CGAACGTTCA CGATTCAGGA CAGCGGAGGG ACCACACTGA CGATTGCAAA GGGTATTGAA
CTTGTTCGCC GCATGTTGCC CGAAGCAAAC AACGTGAGGC GGGAACCGGT CAGCGCAAGT
CATCTTACCG TCGGCCTTCA ATGCGGAGGC TCGGACGGGT ACTCAGGCAT CACCGCCAAT
CCAGTGCTGG GCGCAGCCGT TGATTTGCTG GTGCAGCACG GCGGCACCGC GATTCTCTCG
GAGACGCCCG AAATCTATGG CGCGGAGCAC TTACTAACGC GCCGCGCCGA AACGCCCGAG
GTCGGTCAGA AGCTGATTGA TCGCATCAAG TGGTGGGAGG CCTATGCGCA GCGGCAAGGG
GCGCAAATCA ATAACAATCC GTCTGCGGGC AACAAGGCAG GTGGCTTGAC AACCGTCCTT
GAAAAATCGC TGGGAGGTAT TGCGAAAGCC GGGTCTACCA ATTTGGTCGC AGTGTACGAA
TATGCCCAGC CAATCACAGC GTGCGGACTT GTTTTTATGG ACACGCCTGG CTACGACCCG
GTGTCGGCTA CCGGCCAGGT AGCCGGCGGT GCGAATCTAA TCTGTTTCAC GACGGGTCGT
GGTTCAGCAT ACGGCTGCGC GCCCGCCCCG TCGGTCAAAC TTGCGACGAA CACAGCACTT
TGGCAACGGC AGTCCGACGA TATTGACTTG AACTGCGGAG AAGTGCTGGA AGGACGCGCG
ACGATTGAGC AACTGGGTCA AGTGCTTTTC GACATGCTGC TAGATGTCGC CTCGGGAACC
CGTTCCCGCA GTGAGCGGCA CGGTTATGGA CAAAACGAAT TCGTACCGTG GCAAATCAGC
GCGATCATGT GA
 
Protein sequence
MSLNLADTSV RTTASMSARV IRLNPADDVV IALEQLVSGT VLDKEAVTVS GLIPPGHKVA 
TRDIGQGEAV HRYGQVIGFA SRPIRAGQHV HTHNLAMGDF ARDYAFGQAA RQTVRSNGPA
TFQGIVRADG RVATRNYIGI LTSVNCSATV ARAIADHFRR DIHPDELAAF PNVDGVVALT
HGSGCAIDSE GDGLAILQRT LGGYACHPNF ASVLVIGLGC ETNQIPRLLE TQGLREDDRL
RTFTIQDSGG TTLTIAKGIE LVRRMLPEAN NVRREPVSAS HLTVGLQCGG SDGYSGITAN
PVLGAAVDLL VQHGGTAILS ETPEIYGAEH LLTRRAETPE VGQKLIDRIK WWEAYAQRQG
AQINNNPSAG NKAGGLTTVL EKSLGGIAKA GSTNLVAVYE YAQPITACGL VFMDTPGYDP
VSATGQVAGG ANLICFTTGR GSAYGCAPAP SVKLATNTAL WQRQSDDIDL NCGEVLEGRA
TIEQLGQVLF DMLLDVASGT RSRSERHGYG QNEFVPWQIS AIM