Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5792 |
Symbol | |
ID | 6182042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 323349 |
End bp | 324920 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641688927 |
Product | Altronate dehydratase |
Protein accession | YP_001815786 |
Protein GI | 172065074 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTGA ATCTCGCCGA CACGTCCGTC CGAACCACCG CGTCAATGTC GGCTCGTGTC ATAAGACTCA ATCCTGCCGA CGATGTCGTT ATCGCGCTCG AACAGCTTGT GTCCGGCACC GTGCTCGACA AGGAAGCAGT GACGGTCTCG GGACTGATTC CGCCCGGGCA CAAAGTAGCG ACACGTGACA TCGGTCAGGG TGAGGCGGTA CACCGCTACG GCCAGGTAAT CGGCTTTGCG AGTCGGCCGA TTCGCGCAGG GCAGCATGTA CACACCCACA ACCTCGCCAT GGGCGACTTT GCGCGTGACT ACGCGTTCGG TCAGGCCGCG CGTCAGACCG TGCGCTCGAA CGGGCCCGCG ACATTCCAGG GCATTGTTCG CGCAGACGGC CGAGTTGCCA CACGCAACTA CATCGGGATC CTCACCTCGG TAAATTGCTC GGCTACGGTT GCGCGAGCCA TTGCCGATCA TTTTCGCCGC GACATTCATC CAGATGAATT GGCCGCGTTC CCGAACGTCG ATGGCGTCGT GGCGCTCACA CACGGTTCGG GTTGCGCGAT CGACTCTGAA GGCGATGGTC TGGCGATCTT GCAGCGCACG CTTGGCGGCT ATGCCTGCCA CCCAAACTTC GCAAGCGTGC TGGTCATCGG TCTCGGCTGT GAAACAAATC AAATTCCGCG ACTTCTCGAG ACGCAGGGAC TCCGGGAAGA CGACCGCTTG CGAACGTTCA CGATTCAGGA CAGCGGAGGG ACCACACTGA CGATTGCAAA GGGTATTGAA CTTGTTCGCC GCATGTTGCC CGAAGCAAAC AACGTGAGGC GGGAACCGGT CAGCGCAAGT CATCTTACCG TCGGCCTTCA ATGCGGAGGC TCGGACGGGT ACTCAGGCAT CACCGCCAAT CCAGTGCTGG GCGCAGCCGT TGATTTGCTG GTGCAGCACG GCGGCACCGC GATTCTCTCG GAGACGCCCG AAATCTATGG CGCGGAGCAC TTACTAACGC GCCGCGCCGA AACGCCCGAG GTCGGTCAGA AGCTGATTGA TCGCATCAAG TGGTGGGAGG CCTATGCGCA GCGGCAAGGG GCGCAAATCA ATAACAATCC GTCTGCGGGC AACAAGGCAG GTGGCTTGAC AACCGTCCTT GAAAAATCGC TGGGAGGTAT TGCGAAAGCC GGGTCTACCA ATTTGGTCGC AGTGTACGAA TATGCCCAGC CAATCACAGC GTGCGGACTT GTTTTTATGG ACACGCCTGG CTACGACCCG GTGTCGGCTA CCGGCCAGGT AGCCGGCGGT GCGAATCTAA TCTGTTTCAC GACGGGTCGT GGTTCAGCAT ACGGCTGCGC GCCCGCCCCG TCGGTCAAAC TTGCGACGAA CACAGCACTT TGGCAACGGC AGTCCGACGA TATTGACTTG AACTGCGGAG AAGTGCTGGA AGGACGCGCG ACGATTGAGC AACTGGGTCA AGTGCTTTTC GACATGCTGC TAGATGTCGC CTCGGGAACC CGTTCCCGCA GTGAGCGGCA CGGTTATGGA CAAAACGAAT TCGTACCGTG GCAAATCAGC GCGATCATGT GA
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Protein sequence | MSLNLADTSV RTTASMSARV IRLNPADDVV IALEQLVSGT VLDKEAVTVS GLIPPGHKVA TRDIGQGEAV HRYGQVIGFA SRPIRAGQHV HTHNLAMGDF ARDYAFGQAA RQTVRSNGPA TFQGIVRADG RVATRNYIGI LTSVNCSATV ARAIADHFRR DIHPDELAAF PNVDGVVALT HGSGCAIDSE GDGLAILQRT LGGYACHPNF ASVLVIGLGC ETNQIPRLLE TQGLREDDRL RTFTIQDSGG TTLTIAKGIE LVRRMLPEAN NVRREPVSAS HLTVGLQCGG SDGYSGITAN PVLGAAVDLL VQHGGTAILS ETPEIYGAEH LLTRRAETPE VGQKLIDRIK WWEAYAQRQG AQINNNPSAG NKAGGLTTVL EKSLGGIAKA GSTNLVAVYE YAQPITACGL VFMDTPGYDP VSATGQVAGG ANLICFTTGR GSAYGCAPAP SVKLATNTAL WQRQSDDIDL NCGEVLEGRA TIEQLGQVLF DMLLDVASGT RSRSERHGYG QNEFVPWQIS AIM
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