Gene BamMC406_5780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5780 
Symbol 
ID6182525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp307806 
End bp309200 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content67% 
IMG OID641688916 
Producthypothetical protein 
Protein accessionYP_001815775 
Protein GI172065063 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.186427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT CGATCGACGC ACTGCTACGC GAGGACCGCG CCCACTTCAT GCACCCGTCG 
ACGCACGCGT ACGACCACGA GACCGGCGCG CTGCCCGGCA AGATCGTGCG CGGCGCCGAA
GGCATCCGCA TCGAGGATCA CCAGGGCAAG CGCTATATCG ACGCGTTCGC CGGCCTCTAC
TGCGTGAACA TCGGCTACGG CCGCACCGAG GTCGCCGAGG CGATGTACGA ACAGGCGAAG
CAGCTCGCGT ACTACCACAC GTATGTCGGC CACTCGTCGG ACGCGATCAT CGAGCTGTCG
TCGCGCATCA TCGACTGGGC GCCGGCCGGG ATGAAGAAGG TCTACTACGG GATGTCGGGA
TCCGACGCGA ACGAGACGCA GGTCAAGATC GTCTGGTACT ACAACAACGT GCTCGGCCGG
CCGAACAAGA AGAAGATCAT CTCGCGCGAG CGCGGCTATC ACGGCTCGGG CATCGTGACG
GGCAGCCTCA CGGGCCTGCC GAGCTTCCAC CAGCATTTCG ACCTGCCGAT CGATCGCGTG
AAGCATACGG TGTGTCCGCA CTGGTATCGC AAGGCGCCCG CCGGCCTGAG CGAAGCGCAG
TTCGTCGCGT ACTGCGTCGA CGAACTCGAG AAGCTGATCG CGCGCGAAGG CGCCGACACG
ATCGCGGCGT TCATCGCGGA ACCGGTGATG GGCACGGGCG GCATCATCGA GCCGCCGCGC
GGCTACTGGC CGGCGATCCA GGCCGTGCTG CGCAAGCACG ACATCCTGCT GACCTCGGAT
GAAGTCGTCT GCGGATTCGG GCGCCTCGGC TCGAAGATGG GCGCGCAGCA CTTCGGGATC
GAGCCCGACC TGATCACCGT CGCGAAGGGG CTGACGAGCG CGTATGCGCC GCTGTCGGGC
GTGATCGTGG GCGAGAAGGT GTGGGACGTG ATCGCGCGCG GCTCGCAGGA GCACGGGCCG
ATGGGGCACG GCTGGACGTA CTCGGGGCAC CCGGTATGCG CGGCCGCGGC ACTCGCGAAC
CTCGCGATTC TCGAACGCGA GAACCTGGTC GGCAACGCCG CCGACGTGGG TGCGTATTTC
GGCGCGAAGC TGCGCGATGT GTTCGGCGCG CACCCGCTCG TCGGCGAGGT GCGCAGCGTC
GGGATGCTGG CCGCGCTCGA ATTCATGGCC GACAAGGACG CGCGCACCCC GTTCGATCCG
GCGCTGAAGA TCGGCGCGCA GGTGTCGGCC GCGGCGCTGC AGCGCGGCGT GATCGCGCGC
GCGATGCCGC ATGGGGACAT TCTCGGGTTT GCGCCGCCGC TCGTGATGAC GCGCGAGGAG
GCGGACGAGA TCGTCGGCAT CGTGAAGGAC GCCGTGGACG AGGTCGCGGA GCGGAATATT
TCGACCGTCG CGTGA
 
Protein sequence
MKQSIDALLR EDRAHFMHPS THAYDHETGA LPGKIVRGAE GIRIEDHQGK RYIDAFAGLY 
CVNIGYGRTE VAEAMYEQAK QLAYYHTYVG HSSDAIIELS SRIIDWAPAG MKKVYYGMSG
SDANETQVKI VWYYNNVLGR PNKKKIISRE RGYHGSGIVT GSLTGLPSFH QHFDLPIDRV
KHTVCPHWYR KAPAGLSEAQ FVAYCVDELE KLIAREGADT IAAFIAEPVM GTGGIIEPPR
GYWPAIQAVL RKHDILLTSD EVVCGFGRLG SKMGAQHFGI EPDLITVAKG LTSAYAPLSG
VIVGEKVWDV IARGSQEHGP MGHGWTYSGH PVCAAAALAN LAILERENLV GNAADVGAYF
GAKLRDVFGA HPLVGEVRSV GMLAALEFMA DKDARTPFDP ALKIGAQVSA AALQRGVIAR
AMPHGDILGF APPLVMTREE ADEIVGIVKD AVDEVAERNI STVA