Gene BamMC406_5764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5764 
Symbol 
ID6181881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp290542 
End bp291216 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content70% 
IMG OID641688900 
ProductProQ activator of osmoprotectant transporter ProP 
Protein accessionYP_001815759 
Protein GI172065047 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.733693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.933198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTG AACAACTTGC CGAATTGCGG GCGCAGCTCG CAGCCAAGGC CAAGCAGGAG 
CGCAACGCGA AGCGACCGGC TGCGCAACCG GACGCCGGCG CGAAGCCGAA GTCCGGCGAC
CGGCCCGCTC GTGGGGCCAA ATCGGGTGCC GCGGCCAAAG CGCCGTCCGG TGCCAAGCCC
GCTTCGGCGA AGCCGTCGAC CCCGGTCGAT CCGGTCATCG TCGCGATCGG CAAATTGCAG
CGCCGATTCC CGCGCGCGTT CCCGAAGAAT CCGGCACCGA AGGTGCCGCT GAAGGTCGGC
ATCTGGGACG ATCTCGCCCG CGAGGCGCAG GCCGTCGGCC TGACTGAAGC TGAACTGCGC
GAGGCGATGT CCACGTGGTG CCGCGGCAAT CGTTACTGGT CGTGCCTCGT CGAAGACGCG
GTGCGGGTCG ATCTGCAAGG TAACGAAGCC GGGCGCGTGA CGCACGACGA CGCGGCGCGT
GCGCGCCGGC TGAAGTCGCG TCGTCCGGGC AACAAGGGCA GCGCGCAAGC GGCAAAGGGC
GCATCGCAGC AGCCGAAGGC GGAAGTGCAG GCCGCCGCCG CCGCGCCGCA GCCGGCGACC
GACGAAGCAT CGGCCAACGC AGCACCGGCC AATGCAGCAC CGCAGGCCGA GCAGCAAACG
GCCGCGAGCG AGTAA
 
Protein sequence
MGFEQLAELR AQLAAKAKQE RNAKRPAAQP DAGAKPKSGD RPARGAKSGA AAKAPSGAKP 
ASAKPSTPVD PVIVAIGKLQ RRFPRAFPKN PAPKVPLKVG IWDDLAREAQ AVGLTEAELR
EAMSTWCRGN RYWSCLVEDA VRVDLQGNEA GRVTHDDAAR ARRLKSRRPG NKGSAQAAKG
ASQQPKAEVQ AAAAAPQPAT DEASANAAPA NAAPQAEQQT AASE