| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5752 |
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| Symbol | |
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| ID | 6181869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 274945 |
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| End bp | 275886 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641688888 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001815747 |
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| Protein GI | 172065035 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.515576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGT TACAGATGAT GCGCATTTTC GTCCGGGTGG CGGAAGAGGG CAGCTTCACG
AGCGCGGCCC AGCGCCTGGA CATCACCACC GCCTATGCGT CGCGTTCGGT CGCGCAACTC
GAAACGCATC TGCGCACGCG CCTGCTCAAC CGGAGCACGC GCCGCATCGC ATTGACCGAT
GCCGGGCAGC GCTATCTCGA CCGGTGCCAG CGCATCCTCG GCTATATCGA CGAAGCGGAA
GCCGAGGCGG CGGATGCGCA GGCGAAGCCT TCGGGGCGCC TGCATGTGCA TGCGACCACA
AGTTTTGGCC AGGCCTACGT GGTGCCCGCG GTCGTGCGAT ACCGGCAGCG CTATCCGTCG
GTGGCGGTCG AGCTGACGCT GTCGCAACAC GTGCCCGACA TCATCGACGA AGGTTACGAC
GTGTCGTTGC AACTGAGCTC GGCGGAGCTG CCCGATTCGG GCCTGGTGTC GCAGCGACTC
GGCGATGTTC ATAGCGTGCT GTGTGCGTCG CCCGCTTACT TGAAGGAGCG CGGCACGCCG
CACAGCGTGC GCGATCTCGA AGCGCATTCA TGCCTGCAGA TCGTCACGCC GATCTTTCCG
CGCGACCGCT GGCATCTCGA CGGCCCCGAC GGTCGCGAGA CATTCGAGCT GCCGCTGCCG
GACTTCCAGG TGAACATCGC CGACGCGCTC GGCGCCGCGC TGCGCGCCGG CCTCGGGATC
GGCTCGTTGC CGATGTCGAG CGCGGTGCCC GCCCTGGCGA GCGGCGCGCT GGTTCGCGTG
TTGCCCGAGT ACCGGCTGCA GAAGCTGACG GTCTACACGC TGTATGCGTC GCGCCAGTAC
CTCGACGCGA AGATCCGGAC CTTCGTCGAT TTCCTGCGGG AATGCGTGCC CGAATTGCTG
GCCGCCGACG AAGCCGCACT GCGCGGTTCC TGCGTGTCCT GA
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| Protein sequence | MDTLQMMRIF VRVAEEGSFT SAAQRLDITT AYASRSVAQL ETHLRTRLLN RSTRRIALTD
AGQRYLDRCQ RILGYIDEAE AEAADAQAKP SGRLHVHATT SFGQAYVVPA VVRYRQRYPS
VAVELTLSQH VPDIIDEGYD VSLQLSSAEL PDSGLVSQRL GDVHSVLCAS PAYLKERGTP
HSVRDLEAHS CLQIVTPIFP RDRWHLDGPD GRETFELPLP DFQVNIADAL GAALRAGLGI
GSLPMSSAVP ALASGALVRV LPEYRLQKLT VYTLYASRQY LDAKIRTFVD FLRECVPELL
AADEAALRGS CVS
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