Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5750 |
Symbol | |
ID | 6181867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 272886 |
End bp | 273599 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641688886 |
Product | carboxymethylenebutenolidase |
Protein accession | YP_001815745 |
Protein GI | 172065033 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.588229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.622374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAA CATCCGGTTC CATGATCACG TTTCGCCGCC CCGACGGCAA GGAACTGCAG GGCTACCTCG CGACACCGGA AAAGACCGAA GGTGCACCCG CGGTCGTCGT CGTCCAGGAG TGGTGGGGCC TGAATGACCA GATCCGCGGC GTCGCCGATC GCCTCGCGCG CTGCGGCTAC TTCGCGCTCG TGCCCGATCT GTATCGCGGC AAGTCGACGG TCGAGGAGGA AGAAGCGCAC CACCTGATGA CCGGCCTCGA TTTCGGCGAC GCCGCGTCGC AGGACATTCC GGGCGCAGTG CAATATCTGA AGACGCGCGC GTCGCGCGTG GCAGTCACCG GCTTCTGCAT GGGCGGCGCA CTCACGCTGC TGTCGCTGCA GTTCGCCGAT ATCGATGCCG GCGTCACGTG GTACGGCTTC CCTCCGCTCG ACTACCTCGA TCCGTCGAAG ATCAAGGTGC CGCTGATGGG GCACTGGGGT ACCCAGGATG CGTTCTTCGC GATCGATCAG GTCGATGCGC TGGAGAAGAA GCTGACCGAT GCGAAGGTCG ACATCGAATT CCACCGCTAT CTCGCGCATC ACGCGTTCGC GAACGAAACG GCCGTCGGCC CTGGCCGCAT CGGCGGCACG CAGTTCGATC CGGTGTGGTC GCAGATCGCG TGGGATCGCA CGCTGACGTT CTTCGGGCGC ACGCTCTGGG GCCAGCAGCA GTAA
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Protein sequence | MSQTSGSMIT FRRPDGKELQ GYLATPEKTE GAPAVVVVQE WWGLNDQIRG VADRLARCGY FALVPDLYRG KSTVEEEEAH HLMTGLDFGD AASQDIPGAV QYLKTRASRV AVTGFCMGGA LTLLSLQFAD IDAGVTWYGF PPLDYLDPSK IKVPLMGHWG TQDAFFAIDQ VDALEKKLTD AKVDIEFHRY LAHHAFANET AVGPGRIGGT QFDPVWSQIA WDRTLTFFGR TLWGQQQ
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