Gene BamMC406_5669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5669 
Symbol 
ID6182124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp178030 
End bp178845 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID641688801 
Producthypothetical protein 
Protein accessionYP_001815665 
Protein GI172064953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0126738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CAGCAGTGCA AGGCTATAAC GCCGGCTATC TGAACAGCAT CGACGATGTC 
GGCGGCATTG GCGGCACGAA CGAATCGCAG CTCGCACAAC TGCTCGAGTT GCTCATCGAA
GAAATCAAGC AGATTCTCGA TCCCTCCAGC CAGAATTCGG GCGATGCGGG CGGTGTGGGC
GGCATCGGCG GCGGTACGCC TTCGTACTCC GCGCCGCCCG CCTTTGCCGG CGGTGGCGGC
GCCGCACCCG CTGGCGTGAG TGGCGGCGGT GGCGGCCACG GCGGTGGCGG CGCGTCGCCG
GGCATAGGCG GCGGTGGAAG CGGTGGCGGC GGCAGCCACG GCAACACGCT GCCCACTGTA
TCGGGCGGCG ACGCCGCGCA CGCCATCGCA CAGGACCTCA AATCGCGCTA CGGCCTGACC
GACGCGCAGG TAGCCGGCGT ACTCGGCAAC CTGCAGCAGG AAAGCGGGCT GCAAGGCAAC
GTCAATCAAG GCGGCGCGAA GGGCGCGCCC TCCGGCAACT TCGCGGACGA CAACGCCAAC
GGCTGGGGTC TTGCGCAATG GGGCGGCACA CGCAAACAAG GCGAAATCAA CTATGCGAAG
GAGCACGGGC TCGACCCGGG CAGCCTCGAA GCCAACATCG GCTTCATGAA TCAGGAACTC
GACACGACGT ACAGCAAGAC GATCACGGAC ATCAAGCAGA CGACGACGGC GGAACAAGCG
GCACTGGTCT GGGACAAGGA CTACGAACAG GCCACCGATC CGCAAATGGA AAACCGCAAC
AAGTACGCCG AGCAATTCCT CGCGCAAGGT TTCTGA
 
Protein sequence
MSTTAVQGYN AGYLNSIDDV GGIGGTNESQ LAQLLELLIE EIKQILDPSS QNSGDAGGVG 
GIGGGTPSYS APPAFAGGGG AAPAGVSGGG GGHGGGGASP GIGGGGSGGG GSHGNTLPTV
SGGDAAHAIA QDLKSRYGLT DAQVAGVLGN LQQESGLQGN VNQGGAKGAP SGNFADDNAN
GWGLAQWGGT RKQGEINYAK EHGLDPGSLE ANIGFMNQEL DTTYSKTITD IKQTTTAEQA
ALVWDKDYEQ ATDPQMENRN KYAEQFLAQG F