Gene BamMC406_5642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5642 
Symbol 
ID6182457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp147415 
End bp148368 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content66% 
IMG OID641688774 
Producthypothetical protein 
Protein accessionYP_001815638 
Protein GI172064926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.79123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.10839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCT CCGCCCCTCA TCGCGCACGC ATCATCGCCG CGCCGACGCA GCATGACGAG 
CCGGCACCCG ACATGCCGGC CGCGCAATTG AGCCGCCAGG CCGCGCTGTT TCAGCGCCTG
CGCGAAGGCG CCCGCGCCCA CGCATCGGAA ACGGACGGCG ACGAGCAACC CTGCTCCGCG
CCCGCCGAAC CGCAGCCCGC CAGTCCAGCC GATGCGGCTT ACCCGATCGC CGGTCTCGCC
GCCGACGAAG ATCGCGACAA TGCCGGCGGC GGCGAACGTG ACGACGATGC ACCGGCCGGT
GCCGGCAACG AACACGACGA GCCTGACGCG CACGCCGGAT CGGCCATGTC AGTATCCGCG
CAGATTCATC CATTCATGCA TTTTTCGACG CATTTGCCGG TCCGTTCATC CATGCACCCG
ACCATGGACG TGCCGACGCG TCCGACAACG CCGACTTCAC CTTCGCTTTC GACTTCGACC
TCGATGCGCG GCGCGACGCC GCCTTCGTTG CCGATGCCGC CGAAAGGACC GGTGCCGACA
TCAGCGCTCA CCGTACCGAC CGTGCCCCGA GCGCTGGCCG CCAGTGAGAC GCCAAGCCGG
CAAGTCGGCG GCCCGCGCGT CGTGGCGGCC ATCGCGGCAC CGTCGCGAGC GGGCCAGGAC
ATGAACCGGT TCGTCGACTC GATCGTCGCC GAAGTGTCCC ACTTCTGCGC CAACCCGATC
GTCCTCGAAA GCGGCGACTG GCAACTGACG ATTCCCATCG ATCCGGCGCT GCTGCCGGGC
TGTACGTTGA ACCTCGTGCT TTCGCATTTC CAATTGACGC TTCGCTTCGA CACCACGGAC
GAACGGTCGC GCGAACTAAT CTCACAACAT GCGACGACGT TGCGCGAAAG CCTCGATGAA
GTGATGCAAA GCCGCTTCGA CGGCACGCGC GGCGTCGAAA TCATCGTCAC GTAA
 
Protein sequence
MHTSAPHRAR IIAAPTQHDE PAPDMPAAQL SRQAALFQRL REGARAHASE TDGDEQPCSA 
PAEPQPASPA DAAYPIAGLA ADEDRDNAGG GERDDDAPAG AGNEHDEPDA HAGSAMSVSA
QIHPFMHFST HLPVRSSMHP TMDVPTRPTT PTSPSLSTST SMRGATPPSL PMPPKGPVPT
SALTVPTVPR ALAASETPSR QVGGPRVVAA IAAPSRAGQD MNRFVDSIVA EVSHFCANPI
VLESGDWQLT IPIDPALLPG CTLNLVLSHF QLTLRFDTTD ERSRELISQH ATTLRESLDE
VMQSRFDGTR GVEIIVT