Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5636 |
Symbol | |
ID | 6182451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 140970 |
End bp | 141728 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641688768 |
Product | hypothetical protein |
Protein accession | YP_001815632 |
Protein GI | 172064920 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.105231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAT ACGACGCAAC CGACGACAGC CTCGCCGCCG CAAGCGGCGC GACGGCGCTT GACTGCGTCG CGGTGCCGGC GGCCGTTGCG GCCCGGCTGG ATAGCCATCT TCGGCGCCGG CGCACGCTAT TCGACTGGAT GCATCCTGCG CGCCGCGCGC AGGTGCCCTG CGCGGACCTG CTCGACGCAT GTGGCCCGGG GCAGGTCGAG GCGCTCGCCG CCGCGCTGCT CGACGAATGG GGCGTGCCGG TGCCGCCGCT CGCCGCGTTC GACGCGCCGG ACTCGGCACT GGCCGTGCTG CCGGCACAGG ATTGTATGAC CGTGTTCCGC TTGCGCGCGC TCGTGGAGCA GGCCGACGCG TTGCGCGCTT GGATCGACCG GCCGCGCCGC GAGAAATTGG CGAGCTGGAT CGGGGCGCGC GGCGTGAAGC TGCTCCTGGC GCGCGGGCGC GACCTTGGCG GGGATGCCCG CTTGCTTGCC GCGCGCGCGC ATGACACGTC ATCGGCCATG CACGTGTCGC TCGACTCGGC TGATGGCGAT GCGCTCGCGT GGCTCGGTTT TCGGCTCTTC GAGCGCGACT GCCGGTGGGC GCCGAGCGGC CCGCTCGCGA TCATGCAGTT GGCCATGCCG GCGCGCGACG ACGCGGGGGC GCTGCCGCCA CCTTCGTTGC CGACTTCATT ACTGCCTTCG GAGGGCTCGA ACCCGAGCCT TTCGATCGTC TCGCAACTGC CCGACTTGTT TCCGGAGTGG TCATGGTGA
|
Protein sequence | MSTYDATDDS LAAASGATAL DCVAVPAAVA ARLDSHLRRR RTLFDWMHPA RRAQVPCADL LDACGPGQVE ALAAALLDEW GVPVPPLAAF DAPDSALAVL PAQDCMTVFR LRALVEQADA LRAWIDRPRR EKLASWIGAR GVKLLLARGR DLGGDARLLA ARAHDTSSAM HVSLDSADGD ALAWLGFRLF ERDCRWAPSG PLAIMQLAMP ARDDAGALPP PSLPTSLLPS EGSNPSLSIV SQLPDLFPEW SW
|
| |