| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5620 |
|---|
| Symbol | |
|---|
| ID | 6182703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 123754 |
|---|
| End bp | 124545 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641688752 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001815616 |
|---|
| Protein GI | 172064904 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.33769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.48153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG CTGCTCCCGT TGCGCTGTCG GTCAAGAACA TCCACAAGTC GTTTGGCGAT
CATCATGTGC TGAAGGGTAT CTCGCTCGAC GCGCACGAAG GCGACGTCAT CTCGATCCTC
GGCGCGAGCG GCTCGGGCAA GAGCACCTTC CTGCGCTGCC TGAACCTGCT CGAAACGCCC
GACGACGGCT CCGTCGCGCT TGCCGGCGAG GAACTGAAGA TGAAGCGCGC ACGCGACGGC
AAGCTGCAGC CGGGCGACCG GCGGCAGGTC GATCGCATCC GCTCGCAGCT CGGGATGGTG
TTCCAGAACT TCAACCTGTG GTCGCACATG ACGGTGCTCG ACAATCTCGT CGAAGGGCCG
CTGCGCGTGC TCAAGCGCAG CCGCGCGGAA GCGGTCGAGG AAGCCGAGGC GCTGCTCGCG
CGCGTCGGTC TCGCGGACAA GCGCGGCTAC TATCCCGCGC ACCTGTCGGG TGGCCAGCAG
CAGCGCGTCG CGATCGCCCG CGCGCTCGCG ATGCATCCGA AGGTGATGTT GTTCGACGAA
CCGACGTCGG CGCTCGACCC GGAGCTGGTT GGCGAAGTGC TGCGCGTGAT GCGCTCGCTC
GCCGAGGAAG GGCGCACCAT GCTGGTCGTC ACGCACGAGA TGGGCTTCGC GCGGCACGTG
TCGAATCGCG TGATGTTCCT GCATCAGGGC GAAGTCGATT CGGACGGGCC GCCCGACGCG
CTGTTCGGCG GCCAGTGTTC CGAGCGCTTC CGCCAGTTCG TGTCGAGCCA TCACGACCGC
GCCGCGAACT GA
|
|---|
| Protein sequence | MNTAAPVALS VKNIHKSFGD HHVLKGISLD AHEGDVISIL GASGSGKSTF LRCLNLLETP
DDGSVALAGE ELKMKRARDG KLQPGDRRQV DRIRSQLGMV FQNFNLWSHM TVLDNLVEGP
LRVLKRSRAE AVEEAEALLA RVGLADKRGY YPAHLSGGQQ QRVAIARALA MHPKVMLFDE
PTSALDPELV GEVLRVMRSL AEEGRTMLVV THEMGFARHV SNRVMFLHQG EVDSDGPPDA
LFGGQCSERF RQFVSSHHDR AAN
|
|---|
| |