Gene BamMC406_5578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5578 
Symbol 
ID6182505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp79776 
End bp80180 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content61% 
IMG OID641688710 
Productcupin 2 domain-containing protein 
Protein accessionYP_001815574 
Protein GI172064862 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TCATGCTCAC GCTCGCGCCG CTTGCGCTGT CGCTGTTGAT GCCCGTCCAG 
CCGGCCGCCG CCGCACCGCA AGCCAAGGTT ACGACGCTGA CCACGGAGCC GTTGCCCGAG
TATCCGGGCA AGGAGGTCGA GATGATCGTC GTCGATTATC CGCCCGGCAG CGTCGATCCC
GTTCATCGTC ACGACGCGCA CGCATTCGTC TATGTGCTCG ACGGCAGCAT CGTGATGGGC
CTGAACGGCG GGAAGGAGGT CACGCTTCAC GCCGGCGACA CATACCACGA AGGCCCAAAG
GATATCCACA CGGTCGGACG AAATGCCAGC AGCACGAAGC CGGCAAAATT CGTCGTGTTC
ATGATCAAGA ACCAAGGTGC GCCGATCCTC ACACCCGTGA AATAG
 
Protein sequence
MKRIMLTLAP LALSLLMPVQ PAAAAPQAKV TTLTTEPLPE YPGKEVEMIV VDYPPGSVDP 
VHRHDAHAFV YVLDGSIVMG LNGGKEVTLH AGDTYHEGPK DIHTVGRNAS STKPAKFVVF
MIKNQGAPIL TPVK