| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5565 |
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| Symbol | |
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| ID | 6182492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 64409 |
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| End bp | 65692 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641688697 |
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| Product | patatin |
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| Protein accession | YP_001815561 |
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| Protein GI | 172064849 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCGA GCCAGCGTAA CAAGCTGAAG CAGCCTCCCC ACATCAAGCT TCCCGCTTAT
GACGAAATCG GGCTCGTGCT GCAGGGCGGC GGCGCCCTCG GCTCATACCA GGCCGGCGTA
TACGAGGGTA TGGCCGAGGT CGGCGTGGAA CCGACGCGCA TCGCCGGGGT ATCGATCGGT
GCGCTGAACA CGGCGATCAT CGCAGGCAAT GCGCCCACGG ATCGAACGGA AGCACTGCGC
GGCTTCTGGA ACACCGTCAG TCAGCCGACC GATCCTCTCT CGCACTTCGG CAATTACGTG
TCGGCGTGGC CTGGGCTGGA AGACATCGGA CGCAGGTGGT CGAGCGCATG GGCCGCAACG
CGCACGTTGA TGGAAGGCCA GGACGGTTTT TTCTCCCCGC GCTCGCATGC GCCTTTCGCC
GGGTTCGGCA GGAAACGCCC CGACCAGATC AGCTATTACG ATACGTCGGC GTTGCGTGAA
ACGCTGTTGC GGTACGCAGA CTTCGATCGC ATCAATGACG GAAACATTCG CGTATCCGTC
GGCGCGGTCA ATGTGAGAAC GGGCAATCTC GTCTATTTCG ACAATTCGAA AATGCGTCTC
GCACCCGAAC ATTTCATCGC CTCCGGCGCG CTGCCGCCGG GCTTTCCGGC GGTCGAGATC
GATGGCGAGT TCTACTGGGA CGGCGGACTG GTTTCCAACA CGCCGCTGAC CGAAATCATC
AGGGAAAGCC AGCACAAGGA CACGCTCGTT TTCCAGATCG ATCTGTGGAG CTCGCGAGGC
AAGTTGCCCG GCGATTTCCT CGACGTCAGC GAGCGTACCA AGGACATTCA GTATTCAAGC
CGCACGCGAG CCATCACTGC GTTCATGTCG CAGAACCAGA AGCATGCGCA GATGATCAAG
GCGCTGCTCG AACACATTCC CGAACACGTG CGGCGTGCGC ACCCGTTGTT GCAGGAGGCG
CAGAAGACGG CCGATGGCAG CGCAGTGAAC GTCGTGCACC TGATCTACAA GAACAAGGCG
TTCGAGGGGC ACTACAAGGA CTATGAATTC AGCAAGGACA CGATGCGCGA GCATTGGGCG
AGCGGCCTCG AGGATATTCG GCGTTCGTTC GGACACCCGG ACTGGTTCGA TATCCCGAAC
CGCGAAATCG GCTTCGTCAC GCGGGACGTT CACCGCTATC GGCAGGACGT CAATGAAACG
GAAGGCCGGG GCGCGGACGC TTTGCCGCTA GCGAAACGCT CGCGGGAGCG GGAGCGGGAG
CGGGAGCCGT CCGTCACCAG GTAA
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| Protein sequence | MYSSQRNKLK QPPHIKLPAY DEIGLVLQGG GALGSYQAGV YEGMAEVGVE PTRIAGVSIG
ALNTAIIAGN APTDRTEALR GFWNTVSQPT DPLSHFGNYV SAWPGLEDIG RRWSSAWAAT
RTLMEGQDGF FSPRSHAPFA GFGRKRPDQI SYYDTSALRE TLLRYADFDR INDGNIRVSV
GAVNVRTGNL VYFDNSKMRL APEHFIASGA LPPGFPAVEI DGEFYWDGGL VSNTPLTEII
RESQHKDTLV FQIDLWSSRG KLPGDFLDVS ERTKDIQYSS RTRAITAFMS QNQKHAQMIK
ALLEHIPEHV RRAHPLLQEA QKTADGSAVN VVHLIYKNKA FEGHYKDYEF SKDTMREHWA
SGLEDIRRSF GHPDWFDIPN REIGFVTRDV HRYRQDVNET EGRGADALPL AKRSRERERE
REPSVTR
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