| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5527 |
|---|
| Symbol | |
|---|
| ID | 6181982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 16329 |
|---|
| End bp | 17225 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641688659 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001815523 |
|---|
| Protein GI | 172064811 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.453026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACG CTTCCCCGGG GTGGATCGAT CAGCGGCTGG CCCTCGTCGG CACGGCCGAC
GTGCCGCTGT ACGTGATCGT CAACGACGAG GCCGCGACGC TGATCGAGGG TGGCCTGAGC
GGCATGACGG AGCTCGTGTG GCAGCAGCTT CACGACCTGC TGCGGGACTT TGGCGGCATC
CGGCATTTGC GCTACTGGCT GATCACCCAC TCGCACTATG ACCATTGCAG CCTGCTGATG
ACGCTCAAGT CGCGCATGCC GTGGCTCCAT GTGTCCGGTT CTCCCGACGC GTTCGATGCG
TTCCAGAGCC CGTCGGCCTG CCGAACCATC CGTCAGCTCG ACGCGCAAGC GTCACGGTCG
TGGGATCCCG CCGTCGGCGT CGATTTCACC GAGTTATCCG ACCTGCCGTT CTACCCGGTC
AATCCGGACA CACAGCTCGA CATCGGCGAC GGGATGCAGA TTCGCACGAT CGCGCTGCCG
GGCCACAGCC GTTGCCAGTT CGGCTACTAC TGCCCGCAGC TGGACATCGG TTTCGTGTCG
GATGCGCTCG GCGAATTTCA GGGCGCCACC AGCTGGCTGC CGCTGGTCTT TCAGGACCTG
TTTGCGTATC GGCACACGCT GGACGTCATC GAGCAACTGC AGGCGCCGCG GCTCGCATTG
GGACATCACG GCATCCTCAC CGGCGAGCTC GCCCGATCGG CCGTGCGGCA TGCACGTGCG
TGCCTCGATG CGCGCGAGGC CGACGCACGC GCGGTTCGCG GCAACGCCAC CGCCACGCAC
GAACTGGCCC ACCACTGGAC TGCGCGTTAT GCGGCAAGGA GCGAACGGGT GGTGCCGCAT
TTCCTGCACC TCAAAAGCAT GATGCACATG ATCGATCTGT TCCATCGCGC CGAATAG
|
|---|
| Protein sequence | MLNASPGWID QRLALVGTAD VPLYVIVNDE AATLIEGGLS GMTELVWQQL HDLLRDFGGI
RHLRYWLITH SHYDHCSLLM TLKSRMPWLH VSGSPDAFDA FQSPSACRTI RQLDAQASRS
WDPAVGVDFT ELSDLPFYPV NPDTQLDIGD GMQIRTIALP GHSRCQFGYY CPQLDIGFVS
DALGEFQGAT SWLPLVFQDL FAYRHTLDVI EQLQAPRLAL GHHGILTGEL ARSAVRHARA
CLDAREADAR AVRGNATATH ELAHHWTARY AARSERVVPH FLHLKSMMHM IDLFHRAE
|
|---|
| |