Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5527 |
Symbol | |
ID | 6181982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 16329 |
End bp | 17225 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641688659 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001815523 |
Protein GI | 172064811 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.453026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACG CTTCCCCGGG GTGGATCGAT CAGCGGCTGG CCCTCGTCGG CACGGCCGAC GTGCCGCTGT ACGTGATCGT CAACGACGAG GCCGCGACGC TGATCGAGGG TGGCCTGAGC GGCATGACGG AGCTCGTGTG GCAGCAGCTT CACGACCTGC TGCGGGACTT TGGCGGCATC CGGCATTTGC GCTACTGGCT GATCACCCAC TCGCACTATG ACCATTGCAG CCTGCTGATG ACGCTCAAGT CGCGCATGCC GTGGCTCCAT GTGTCCGGTT CTCCCGACGC GTTCGATGCG TTCCAGAGCC CGTCGGCCTG CCGAACCATC CGTCAGCTCG ACGCGCAAGC GTCACGGTCG TGGGATCCCG CCGTCGGCGT CGATTTCACC GAGTTATCCG ACCTGCCGTT CTACCCGGTC AATCCGGACA CACAGCTCGA CATCGGCGAC GGGATGCAGA TTCGCACGAT CGCGCTGCCG GGCCACAGCC GTTGCCAGTT CGGCTACTAC TGCCCGCAGC TGGACATCGG TTTCGTGTCG GATGCGCTCG GCGAATTTCA GGGCGCCACC AGCTGGCTGC CGCTGGTCTT TCAGGACCTG TTTGCGTATC GGCACACGCT GGACGTCATC GAGCAACTGC AGGCGCCGCG GCTCGCATTG GGACATCACG GCATCCTCAC CGGCGAGCTC GCCCGATCGG CCGTGCGGCA TGCACGTGCG TGCCTCGATG CGCGCGAGGC CGACGCACGC GCGGTTCGCG GCAACGCCAC CGCCACGCAC GAACTGGCCC ACCACTGGAC TGCGCGTTAT GCGGCAAGGA GCGAACGGGT GGTGCCGCAT TTCCTGCACC TCAAAAGCAT GATGCACATG ATCGATCTGT TCCATCGCGC CGAATAG
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Protein sequence | MLNASPGWID QRLALVGTAD VPLYVIVNDE AATLIEGGLS GMTELVWQQL HDLLRDFGGI RHLRYWLITH SHYDHCSLLM TLKSRMPWLH VSGSPDAFDA FQSPSACRTI RQLDAQASRS WDPAVGVDFT ELSDLPFYPV NPDTQLDIGD GMQIRTIALP GHSRCQFGYY CPQLDIGFVS DALGEFQGAT SWLPLVFQDL FAYRHTLDVI EQLQAPRLAL GHHGILTGEL ARSAVRHARA CLDAREADAR AVRGNATATH ELAHHWTARY AARSERVVPH FLHLKSMMHM IDLFHRAE
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