| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5450 |
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| Symbol | |
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| ID | 6179146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2688607 |
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| End bp | 2689791 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641685205 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001812110 |
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| Protein GI | 172064459 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.680262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC TGCTGATCCG CAACGTCCGC ACGCACGCCG ACGAAGCACT CGACATCCTG
ATCGAAGGCG AGCGCATCGC GCGCGTCGGC CCGTCGCTCG ACGCGCCGGC GGGCTGCGCG
ATCGAGGACG GCGCGCACGC GCTTGCGCTG CCCGGCCTCG TCGAAGGCCA CACGCATCTC
GACAAGACCC ACTGGGGCAT GCCGTGGTAT CGCAACGCGG TGGGGCCGCG CCTCGTCGAC
CGCATCGAGA ACGAGCGCCA CTACCGCGCG ACGAGCGGTC ACGATGCGGG CGCCGCGTCG
CTCGCGCTGG CGCGCGCGTT CCTCGCGGCC GGCACGACGC GCATCCGCAC GCACGTCGAC
GTCGACACCG ACGCCGGGCT GCGGCATCTG CATGGCGTGC TCGCAACGCG CGAGACGCTG
CGCGGCCAGG TGGAGATCCA GATCGTCGCG TTTCCGCAGT CGGGCGTGCT CAAGCGGCCC
GGCACCGCCG CGCTGCTGTC CGACGCGCTC GGCGCGGGCG CCGACCTGCT CGGCGGCCTC
GACCCGTGCG CGATCGAAGG CGATCCGGTC GAAGCGGTGG ACGTGCTGTT CGGCATCGCC
GAGCGCCACG GCCGCGGGCT CGACCTGCAC CTGCACGAGC GCGGGTCGAT GGGCGCGTAC
TCGCTCGACC TGATCCTGCA GCGCACGGCC GCGCTCGGCA TGCAAGGCAA GGTCACGATC
AGCCACGGCT TCTGCCTCGG CGACGTTGCC GGCCGCGAGC GCGACGCGCT GCTCGCGCGG
ATGGCCGAAC TCGGCGTCGC GATCGTCACG ACCGCGCCGG CCGCGGTGCC CGTGCCGTCG
GTCGTCGCGT GTCGGGCGGC CGGCGTGACC GTCGTCGGCG GCAACGACGG CGTGCGCGAT
ACGTGGACGC CGTACGGTTC GCCCGACATG CTGGAACGCG CGATGCTGAT CGGCATGCGC
AACGATTTCC GCCGCGACGA CGCGCTCGAA GTCGCACTCG ACTGCGTGAC GCACAGCGCG
GCGCGTGGTT GCGGCTTCGC CGATTACGGG CTGGAGGCCG GCAAGCGTGC GGACGTCGTG
CTCGTCGATG CGCTGACGTT CGCCGAGGCC GTCGTCGCGC GGCCGACGCG TCGGCTCGTC
GTGTCGTCGG GGCGGATCGT CGCGCGCGAC GGCGTGCTGG TCTGA
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| Protein sequence | MTNLLIRNVR THADEALDIL IEGERIARVG PSLDAPAGCA IEDGAHALAL PGLVEGHTHL
DKTHWGMPWY RNAVGPRLVD RIENERHYRA TSGHDAGAAS LALARAFLAA GTTRIRTHVD
VDTDAGLRHL HGVLATRETL RGQVEIQIVA FPQSGVLKRP GTAALLSDAL GAGADLLGGL
DPCAIEGDPV EAVDVLFGIA ERHGRGLDLH LHERGSMGAY SLDLILQRTA ALGMQGKVTI
SHGFCLGDVA GRERDALLAR MAELGVAIVT TAPAAVPVPS VVACRAAGVT VVGGNDGVRD
TWTPYGSPDM LERAMLIGMR NDFRRDDALE VALDCVTHSA ARGCGFADYG LEAGKRADVV
LVDALTFAEA VVARPTRRLV VSSGRIVARD GVLV
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