| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5403 |
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| Symbol | |
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| ID | 6179753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2642532 |
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| End bp | 2644136 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641685158 |
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| Product | thioredoxin domain-containing protein |
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| Protein accession | YP_001812063 |
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| Protein GI | 172064412 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2143] Thioredoxin-related protein |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.236496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.698068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG TTCTCCGCAA CCTGACTGCC GCCTGCCTGT TCGCCGCCGC CGGTGCGGCG
TTCGCCAACC CCGCACCGCA GGGCGCTGCC GTGTCGAGTC CGTCGGGCGA CGGCGCGCAT
CTGCCGCCCG GCATCGCGTG GCAGCAAGGC GACGTCGATG CCGCGTTCGC GCTGGCGAAG
CGCACCGGCA AGCCGCTGCT GCTGTACTGG GGCGCGGTGT GGTGCCCATC GTGCAATCAG
GTGAAGTCGA CGATCTTCAG CCAGCAGGCG TTCAAGACCC GCTCGTCGTT CTTCGTGCCG
GTGTATCTGG ACGGCGACAC CGAAAGCGCA CAGAAGCTCG GCGAGCGCTT CAAGGTGCAC
GGCTATCCGA CGATGATCCT GTTCCGCCCG GACGGCACCG AAGTGACGCG GCTGCCGGGC
GAAGCCGATC TCGAGCGCTA CATGCAGGCG CTGTCGCTCG GGATGACGGC CGCGCACCCG
GTGCGGCAGA CGCTCGCGAC CGCGCTGAAC AACGGTGCGT CGCTGACGCC GGACGAATGG
CATCTGCTCG CCGACTATTC ATGGGACACC GACGGTGCGC TGCCGGTGCC GCCCGATCGG
GTCGCGGTGA CGCTGCAGAC GCTGTCGCAG CGTGCGCGGG CAGCCGGCGC GAAGGCGGAC
GCCGCGCGGT TCGCGCTGAA ATCGGCGGTG GTCGCGGCCG CGGACGATCC CGCGCAGGCC
GGCGCGCTCG ACAAGGCCGC ACTCGCCGAC GCGCTGCGCG CGGTGTTGCG CGAGCCGGCG
CTGGCGCGGG CCGATTCGGA TGTGCTCGTC GCGGCGCCCG CGCGCGTGGT CGCCTACCTC
GGCGGCGATG CCGCGCAGCG CGCGAAGCTG CGCGGCGCGT ACGACACGGC GCTCGCGCGC
CTGTCGACCG ACACGACACT GTCGTCGATC GACCGCCTGA TGGCGCTGCA CGGCCGCGTG
CTGCTCGCGC GCGGCGACGC GCACGATGGC GTGCCGCTCG CCGCACCGGC GCCGGCGCTG
GTCGATGCCG CACGCAAGCA GATCGCGGCG TCGGTGCAGG GTGCCGCGAA TCCGTACGAG
CGGCAGGCGC TCGTCAGCGA AGCGGCGGAC ACGCTGACCG ACGCGGGGCT GTACGACGAA
TCCGATGTCT TGCTGAAGGC CGAGTTGCCG CGTTCGGCGA CGCCGTACTA CTTCATGTCC
GGACTGGCCG CGAATGCGAA GGCGCGCGGC GACAAGGCCG CGGCGCTCGA CTGGTACCGG
AAGGCGTACG ACTCGGCGAG CGGACCGGCG ACGAAACTGC GCTGGGGTGC GACCTACTTC
GCGAATGCGG TCGCGCTGGC GCCGGACGAT TCGGCGCGGA TCGAGGCCAT AGCCGCGAGC
GTGCTCGCGC AGGCCGGGAA GACCAGGGAT GCGTTTTATG GGGCGAACCT GCGGGCGCTG
ACCAAGGTCG TCACGCAACT GAACCGCTGG CGCGGCGGCG GCGGCGCGCA CGAGGAGTCG
GTCAGGTCGG TCGTGAAGCA GTTCGATGGG GTATGCGCGA AGCTGCCGGC GGGCGACCCG
CAGGCAGCGG CGTGTGCGAA ATTGATTCAG CCGGTGAAGG CGTAA
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| Protein sequence | MKTVLRNLTA ACLFAAAGAA FANPAPQGAA VSSPSGDGAH LPPGIAWQQG DVDAAFALAK
RTGKPLLLYW GAVWCPSCNQ VKSTIFSQQA FKTRSSFFVP VYLDGDTESA QKLGERFKVH
GYPTMILFRP DGTEVTRLPG EADLERYMQA LSLGMTAAHP VRQTLATALN NGASLTPDEW
HLLADYSWDT DGALPVPPDR VAVTLQTLSQ RARAAGAKAD AARFALKSAV VAAADDPAQA
GALDKAALAD ALRAVLREPA LARADSDVLV AAPARVVAYL GGDAAQRAKL RGAYDTALAR
LSTDTTLSSI DRLMALHGRV LLARGDAHDG VPLAAPAPAL VDAARKQIAA SVQGAANPYE
RQALVSEAAD TLTDAGLYDE SDVLLKAELP RSATPYYFMS GLAANAKARG DKAAALDWYR
KAYDSASGPA TKLRWGATYF ANAVALAPDD SARIEAIAAS VLAQAGKTRD AFYGANLRAL
TKVVTQLNRW RGGGGAHEES VRSVVKQFDG VCAKLPAGDP QAAACAKLIQ PVKA
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