| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5393 |
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| Symbol | |
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| ID | 6180409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2630806 |
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| End bp | 2631654 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641685148 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001812053 |
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| Protein GI | 172064402 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.248396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC TTCGCTATGG CCCGTCCGGC CAGGAAAAGC CCGGTATTCT CGACGCGGAC
GGCCGGATTC GCGACCTGTC CGCGCACGTG CCGGATCTTG CCGGCGACGT GCTGTCCGAC
GCCGCTCTTG CGCGCCTGCG CGCGATCGAC CCGGCCACGT TGCCGCTCGT GTCCGGCGAG
CCGCGTATCG GCGCGTGCGT CGGGCGCGTC GGCAAATTCA TCGGCATTGG CCTGAACTAT
GCCGATCACG CAGCCGAAGC CGGCATGCCG GTGCCGAAGG AGCCAGTGGT ATTCGGCAAG
TGGACGAGTT CGATCTGCGG TCCGAACGAC GGCATCGACA TTCCGAAAGG CTCCGTGAAG
ACGGACTGGG AAGTCGAGCT CGGTGTCGTG ATCGGCACGA CGTGCAAGGA CGTCGACGAA
GCGCGCGCGC TCGATTATGT CGCCGGCTAT TGCGTCGTCA ACGACGTGTC CGAGCGCGAG
TGGCAGATCG AGCGTGGCGG CCAGTGGGAC AAGGGCAAGG GCTTCGATAC GTTCGGCCCG
ATCGGCCCGT GGCTCGTCAC GCGCGACGAG GTGCCCGATC CCCAGCGCGT CGACCTGTGG
CTCGAGATCG ACGGCCACCG CTATCAGAAC GGCAACACGC GCACGATGGT GTTTACCGTG
GCGCAACTGG TCGCTTACCT GTCGACCTGC ATGACGCTAC AACCGGGCGA CGTGATCACG
ACCGGTACGC CGCCGGGCGT CGGGATGGGG ATCAAGCCGT CGCCGGTGTT CCTGAAGGCC
GGCCAGACGG TGCGTCTCGG GATCGACGGG CTCGGCGAGC AGCTGCAAAG CACGCGCAAC
GCGCAGTAA
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| Protein sequence | MKLLRYGPSG QEKPGILDAD GRIRDLSAHV PDLAGDVLSD AALARLRAID PATLPLVSGE
PRIGACVGRV GKFIGIGLNY ADHAAEAGMP VPKEPVVFGK WTSSICGPND GIDIPKGSVK
TDWEVELGVV IGTTCKDVDE ARALDYVAGY CVVNDVSERE WQIERGGQWD KGKGFDTFGP
IGPWLVTRDE VPDPQRVDLW LEIDGHRYQN GNTRTMVFTV AQLVAYLSTC MTLQPGDVIT
TGTPPGVGMG IKPSPVFLKA GQTVRLGIDG LGEQLQSTRN AQ
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