Gene BamMC406_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5333 
Symbol 
ID6179445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2555895 
End bp2556314 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID641685088 
Producthistidine triad (HIT) protein 
Protein accessionYP_001811993 
Protein GI172064342 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG ACAACAACAA CCCGTTCGCC AGGATCCTGC GCGGCGAACT GCCGTGCGTG 
AAGGTCGCCG AAGACGACGC AACCCTCGCG ATCATGGATC TCATGCCGCA GGCCGACGGT
CACGTGCTCG TGATCCCCAA GGAGCCGGCC GCGCAGATCT TCGAGCTGTC CGGCGATGCG
GCCGCGGCCG GCATCCGGAT GACGCAGCGC GTCGCGGCGG CCGTGCGCGC GGCGCTCGGG
CCGGACGGCG TGTTCATCGG CCAGTTCAAC GGCGCGGCGG CGGGCCAGAC GGTTCCGCAC
GTGCATTTCC ACGTGATCCC GCGCTGGGAA GGTGTCGAGT TGCGGCTCCA CGCGCGCGAC
ATCGCCGACG CGGCCGCGCT CGAATCGGTC GCGCAGCGCA TCCGCGAACG TTTCGTGTAA
 
Protein sequence
MSYDNNNPFA RILRGELPCV KVAEDDATLA IMDLMPQADG HVLVIPKEPA AQIFELSGDA 
AAAGIRMTQR VAAAVRAALG PDGVFIGQFN GAAAGQTVPH VHFHVIPRWE GVELRLHARD
IADAAALESV AQRIRERFV