Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5333 |
Symbol | |
ID | 6179445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2555895 |
End bp | 2556314 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641685088 |
Product | histidine triad (HIT) protein |
Protein accession | YP_001811993 |
Protein GI | 172064342 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACG ACAACAACAA CCCGTTCGCC AGGATCCTGC GCGGCGAACT GCCGTGCGTG AAGGTCGCCG AAGACGACGC AACCCTCGCG ATCATGGATC TCATGCCGCA GGCCGACGGT CACGTGCTCG TGATCCCCAA GGAGCCGGCC GCGCAGATCT TCGAGCTGTC CGGCGATGCG GCCGCGGCCG GCATCCGGAT GACGCAGCGC GTCGCGGCGG CCGTGCGCGC GGCGCTCGGG CCGGACGGCG TGTTCATCGG CCAGTTCAAC GGCGCGGCGG CGGGCCAGAC GGTTCCGCAC GTGCATTTCC ACGTGATCCC GCGCTGGGAA GGTGTCGAGT TGCGGCTCCA CGCGCGCGAC ATCGCCGACG CGGCCGCGCT CGAATCGGTC GCGCAGCGCA TCCGCGAACG TTTCGTGTAA
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Protein sequence | MSYDNNNPFA RILRGELPCV KVAEDDATLA IMDLMPQADG HVLVIPKEPA AQIFELSGDA AAAGIRMTQR VAAAVRAALG PDGVFIGQFN GAAAGQTVPH VHFHVIPRWE GVELRLHARD IADAAALESV AQRIRERFV
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