Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5306 |
Symbol | |
ID | 6180020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2527675 |
End bp | 2528268 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641685061 |
Product | hypothetical protein |
Protein accession | YP_001811966 |
Protein GI | 172064315 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.012971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGT TCGGCATCGT CTCCGAATCA GACACGCGGA CCGCGGCGCA CAAGCCGCCT TTCATCCCGT CGTTCGGCTT CGTCGAGGTT CATGAATCGC GGCCGATCGA CGCGCCGCCG TCGCGCATCA TCGACGCCGT GGCCACGCTA GACATGCGGG CCGATCCGGT CATCGACGCG CTGCTGGCCG TGCGCGAAAC CCCGGCGGCC GTCGCCCGCG TGCTGCGCAA TCGTGCGCCC CAAGCCCCGC GCGAGCGCTT CGGTTTCGAC TCCTTCACGC TGCTGCATCG CGACGACACG TCGCTGTCGC TCGGCCTCGT CGGGCGCTTC TGGCACCCGA CGCCCGACGT GCGGACGATC GCCGACGCCG CGGCCTTCGT GCGACACGAC GATCCGCACG ACGCCAAGCT GGTGCTGCGC TTCGAGGTGA TCGGACTGCG CTCCGGCATG CGCCTGCTGC GCACCGAAAC CTTCGTGCAT TGTCCGAGCG CGCGCACGCG GCTGCTGTTC CTGCCGTACT GGCTCGCGAT TCGGCTGGGG AGCGGCTGGA TCCGGCGGCG CACGCTGGCA GCGGTCGAGA CGGCGCTCGC CTGA
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Protein sequence | MNPFGIVSES DTRTAAHKPP FIPSFGFVEV HESRPIDAPP SRIIDAVATL DMRADPVIDA LLAVRETPAA VARVLRNRAP QAPRERFGFD SFTLLHRDDT SLSLGLVGRF WHPTPDVRTI ADAAAFVRHD DPHDAKLVLR FEVIGLRSGM RLLRTETFVH CPSARTRLLF LPYWLAIRLG SGWIRRRTLA AVETALA
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