Gene BamMC406_5215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5215 
Symbol 
ID6180691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2414937 
End bp2415593 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID641684971 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001811876 
Protein GI172064225 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.206806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAC TCTGGTGGCC CGAACTGCTC GACGCGATCC GCGACACGCT GTCGATGGTC 
GCCGCGTCGG CCGCCGTCGC CGCGCTGATC GGCATCCCGC TCGCGGTGAT CCTCGTGACG
ACCGCGCCCG GCGGCATCTA CGAGCGGCGC GGCGTGAACG CCGTGCTCGG CGCGCTCGTC
AACGTGTTCC GCTCGACGCC GTTCATCATC CTGCTCGTCG CGCTGCTGCC GTTCACGCGC
GTGCTGATCG GCACGACGAT CGGCGTGTGG GCGGCCGTCG TGCCCTTGTC GATCGCGGCG
ATTCCGTTTT TCGCGCGAAT TGCCGAAGTG AGCCTGCGCG AAGTCGATCG AGGGCTGATC
GAGGCCGCGC TCGCGATGGG CGCGAAACGC CGCCACATCG TGTGGCACGT GCTGCTGCCC
GAGGCGCTGC CCGGCATGCT CGGCGGCTTC ACCATCACCG TGGTCGCGCT GATCGGCTCG
ACCGCGATGG CGGGCGCCGT CGGCGCGGGC GGGCTCGGCG ATCTCGCGAT CCGCTACGGT
TACCAGCGTT TCGACACCAC CGTGATGGCG ACCGTGATCG TGATCCTGAT CGCACTCGTA
TCGGCCGTGC AGATCACGGG CGACCGCCTG GTCCGACACG TGACCCGGCG TACCTGA
 
Protein sequence
MFELWWPELL DAIRDTLSMV AASAAVAALI GIPLAVILVT TAPGGIYERR GVNAVLGALV 
NVFRSTPFII LLVALLPFTR VLIGTTIGVW AAVVPLSIAA IPFFARIAEV SLREVDRGLI
EAALAMGAKR RHIVWHVLLP EALPGMLGGF TITVVALIGS TAMAGAVGAG GLGDLAIRYG
YQRFDTTVMA TVIVILIALV SAVQITGDRL VRHVTRRT